RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PLXDC1Q8IUK5 500 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 TP53I13Q8NBR0 393 aaPredicted RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 LSM14AQ8ND56 463 aaKnown RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 TOR1AIP2Q8NFQ8 470 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 CASTOR1Q8WTX7 329 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 FYTTD1Q96QD9 318 aaKnown RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 WFDC6Q9BQY6 131 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 SMLR1H3BR10 107 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 GCM2O75603 506 aaPredicted RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 RBBP9O75884 186 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 MT-ND4P03905 459 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 CELA2BP08218 269 aaPredicted RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF24P17028 368 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 PGCP20142 388 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 S1PR1P21453 382 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 DLX2Q07687 328 aaPredicted RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 DHRS4L2Q6PKH6 230 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 UBE3DQ7Z6J8 389 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF227Q86WZ6 799 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 OR5AK2Q8NH90 309 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 PCNPQ8WW12 178 aaKnown RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 ITPKCQ96DU7 683 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 NEURL2Q9BR09 285 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 SERINC1Q9NRX5 453 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 TESQ9UGI8 421 aaKnown RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 C19orf53Q9UNZ5 99 aaPredicted RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 RPH3AQ9Y2J0 694 aaPredicted RBP10.2□□□□□ -0.78
COL27A1-204ENST00000477421 UGT2A1Q9Y4X1 527 aa10.2□□□□□ -0.78
COL27A1-204ENST00000477421 TRAV18A0A075B6X5 111 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 A0A0B4J203 849 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 A0A0G2JMP0 313 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 A0A0X1KG70 313 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 TRIM64CA6NLI5 447 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 I3L521 148 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 PLRG1O43660 514 aaKnown RBP10.19□□□□□ -0.78
COL27A1-204ENST00000477421 SSX4O60224 188 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 SPNP16150 400 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 DNASE1P24855 282 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 HTR1FP30939 366 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 GFERP55789 205 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 PCBP4P57723 403 aaKnown RBP10.19□□□□□ -0.78
COL27A1-204ENST00000477421 RAB38P57729 211 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 FGFBP1Q14512 234 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 KIAA0895LQ68EN5 471 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 OR7E24Q6IFN5 339 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 RNF165Q6ZSG1 346 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 VN1R4Q7Z5H5 301 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 LRRC56Q8IYG6 542 aaPredicted RBP10.19□□□□□ -0.78
COL27A1-204ENST00000477421 OR4M2Q8NGB6 313 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 CEP76Q8TAP6 659 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 COX14Q96I36 57 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 NUDT22Q9BRQ3 303 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 DEFB126Q9BYW3 111 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 IFT46Q9NQC8 304 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 UBQLN4Q9NRR5 601 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 CHST2Q9Y4C5 530 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 APC2O95996 2303 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 MED12Q93074 2177 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 OR5K3A6NET4 321 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 H2AFB2P0C5Z0 115 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF20P17024 532 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 TACR3P29371 465 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 DUSP2Q05923 314 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 POU4F2Q12837 409 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 SERTAD2Q14140 314 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 SF3B4Q15427 424 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL27A1-204ENST00000477421 SSX1Q16384 188 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 GLCCI1Q86VQ1 547 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 PAQR7Q86WK9 346 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 FOXRED2Q8IWF2 684 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 UBQLNLQ8IYU4 475 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 OR2T35Q8NGX2 323 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 ABHD4Q8TB40 342 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 NEK7Q8TDX7 302 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 DUSP19Q8WTR2 217 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 DIO2Q92813 273 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 TMEM41AQ96HV5 264 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 SYT4Q9H2B2 425 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 BCL2L10Q9HD36 194 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 C20orf141Q9NUB4 165 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 SLC22A7Q9Y694 548 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF217O75362 1048 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 TRAPPC6AO75865 159 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 BPNT1O95861 308 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 SLC35E2P0CK97 266 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF41P51814 821 aaPredicted RBP10.19□□□□□ -0.78
COL27A1-204ENST00000477421 PSMA6P60900 246 aaKnown RBP10.19□□□□□ -0.78
COL27A1-204ENST00000477421 HYAL1Q12794 435 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 MAPK14Q16539 360 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 VWA2Q5GFL6 755 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 KCTD18Q6PI47 426 aaPredicted RBP10.19□□□□□ -0.78
COL27A1-204ENST00000477421 FCRLAQ7L513 359 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 PRSS45Q7RTY3 260 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 ACOT12Q8WYK0 555 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 MR1Q95460 341 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 PRRG4Q9BZD6 226 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 PPIL3Q9H2H8 161 aaKnown RBP10.19□□□□□ -0.78
COL27A1-204ENST00000477421 CUTCQ9NTM9 273 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 FBXL4Q9UKA2 621 aa10.19□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF646O15015 1829 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms