RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 JAGN1Q8N5M9 183 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 ACBD7Q8N6N7 88 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 PROKR2Q8NFJ6 384 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 OR9Q1Q8NGQ5 310 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 CMBLQ96DG6 245 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 VWCEQ96DN2 955 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 PHYHIPLQ96FC7 376 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 ABHD17AQ96GS6 310 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 SLC41A3Q96GZ6 507 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 CPB2Q96IY4 423 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 TMEM56Q96MV1 263 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 PITX2Q99697 317 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 FICDQ9BVA6 458 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 C20orf85Q9H1P6 137 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 UBQLN3Q9H347 655 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 MEAF6Q9HAF1 191 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 PLAC1Q9HBJ0 212 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 MSL2Q9HCI7 577 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 C6orf50Q9HD87 102 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 UBE2TQ9NPD8 197 aaPredicted RBP3.85□□□□□ -1.79
CD55-208ENST00000476590 FZD3Q9NPG1 666 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 MAN2C1Q9NTJ4 1040 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 ZCCHC3Q9NUD5 404 aaKnown RBP3.85□□□□□ -1.79
CD55-208ENST00000476590 KLHL8Q9P2G9 620 aaPredicted RBP3.85□□□□□ -1.79
CD55-208ENST00000476590 B4GALT6Q9UBX8 382 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 FBXL4Q9UKA2 621 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 GABRQQ9UN88 632 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 SAMD4AQ9UPU9 718 aaKnown RBP3.85□□□□□ -1.79
CD55-208ENST00000476590 OR10H1Q9Y4A9 318 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 TMEM56-RWDD3S4R434 201 aa3.85□□□□□ -1.79
CD55-208ENST00000476590 LTN1O94822 1766 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 A0A0G2JN53 185 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 A0A0J9YYE9 177 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 A0A1W2PQ45 241 aaPredicted RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 A0A1W2PQY0 241 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 A0A1W2PRV1 198 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 HYKKA2RU49 373 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 OR14I1A6ND48 311 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 ZNF705EA8MWA4 302 aaPredicted RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 C9orf172C9J069 976 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 APOC4-APOC2K7ER74 178 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 UBFD1O14562 309 aaKnown RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 OR7A17O14581 309 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 PIP5K1BO14986 540 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 MDM4O15151 490 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 CYB5BO43169 146 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 PLRG1O43660 514 aaKnown RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 SCN2BO60939 215 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 SH3BGRLO75368 114 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 MTX2O75431 263 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 OR4F21O95013 312 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 CDRT1O95170 752 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 JCHAINP01591 159 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 IL6RP08887 468 aaPredicted RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 IRF2P14316 349 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 MGMTP16455 207 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 SERPINA2P20848 420 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 GPX3P22352 226 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 HTR2CP28335 458 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 GABRR2P28476 465 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 MPGP29372 298 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 BTCP35070 178 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 MAS1LP35410 378 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 CTSOP43234 321 aaPredicted RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 COMPP49747 757 aaPredicted RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 PNLIPRP2P54317 469 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 F2RL1P55085 397 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 RAB8AP61006 207 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 TIMM10P62072 90 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 TCP10Q12799 353 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 MAMLD1Q13495 774 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 HTR4Q13639 388 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 RBM39Q14498 530 aaKnown RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 SSX1Q16384 188 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 GUK1Q16774 197 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 HYAL4Q2M3T9 481 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 RFTN2Q52LD8 501 aaPredicted RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 KHDC3LQ587J8 217 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 PRAMEF18Q5VWM3 479 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 ATG9BQ674R7 924 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 OR4F3Q6IEY1 312 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 TRMT10BQ6PF06 316 aaKnown RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 DPY19L2P2Q6ZN68 376 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 ZNF836Q6ZNA1 936 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 OAFQ86UD1 273 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 ADIPOR2Q86V24 386 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 PARGQ86W56 976 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 MFSD6LQ8IWD5 586 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 SP8Q8IXZ3 490 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 HIST3H2BBQ8N257 126 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 BPIFB2Q8N4F0 458 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 C11orf42Q8N5U0 333 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 LRRC52Q8N7C0 313 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 PNLDC1Q8NA58 520 aaKnown RBP3.84□□□□□ -1.79
CD55-208ENST00000476590 OR5L2Q8NGL0 311 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 OR56B4Q8NH76 319 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 M1APQ8TC57 530 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 APH1BQ8WW43 257 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 HSD17B8Q92506 261 aa3.84□□□□□ -1.79
CD55-208ENST00000476590 TFGQ92734 400 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms