RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 OR4D11Q8NGI4 311 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 C3orf49Q96BT1 292 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 GPATCH1Q9BRR8 931 aaKnown RBP12.14□□□□□ -0.47
RAB5A-208ENST00000476544 POTEKPQ9BYX7 375 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 MYLK2Q9H1R3 596 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 RASSF1Q9NS23 344 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 ELOVL5Q9NYP7 299 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 KLHL13Q9P2N7 655 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 PROCRQ9UNN8 238 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 HDGFL3Q9Y3E1 203 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 MED12LQ86YW9 2145 aa12.14□□□□□ -0.47
RAB5A-208ENST00000476544 IGKV3D-15A0A087WSY6 115 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 A6NNC1 897 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 C5orf58C9J3I9 102 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 CD247P20963 164 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 FPR1P21462 350 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 HTR3AP46098 478 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 P2RY4P51582 365 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 RBBP4Q09028 425 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 CYLC2Q14093 348 aaPredicted RBP12.13□□□□□ -0.47
RAB5A-208ENST00000476544 RNPS1Q15287 305 aaKnown RBP12.13□□□□□ -0.47
RAB5A-208ENST00000476544 NPTX1Q15818 432 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 TRMT5Q32P41 509 aaKnown RBP12.13□□□□□ -0.47
RAB5A-208ENST00000476544 GTF2IRD2BQ6EKJ0 949 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 WBP2NLQ6ICG8 309 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 GTF2IRD2Q86UP8 949 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 RBM45Q8IUH3 476 aaKnown RBP12.13□□□□□ -0.47
RAB5A-208ENST00000476544 GABRG1Q8N1C3 465 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 SLC43A2Q8N370 569 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 CADM2Q8N3J6 435 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 LSMEM1Q8N8F7 131 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 ZIC4Q8N9L1 334 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 SMYD1Q8NB12 490 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 SLC25A43Q8WUT9 341 aaPredicted RBP12.13□□□□□ -0.47
RAB5A-208ENST00000476544 SLC35B4Q969S0 331 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 TAMM41Q96BW9 452 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 DACH2Q96NX9 599 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 C12orf49Q9H741 205 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 GP6Q9HCN6 339 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 TMEM181Q9P2C4 612 aa12.13□□□□□ -0.47
RAB5A-208ENST00000476544 MYO9AB2RTY4 2548 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 ARHGAP21Q5T5U3 1957 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 IGKV1D-42A0A075B6H8 117 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 A0A1B0GWA3 101 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 SH3D21A4FU49 640 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 TMEM247A6NEH6 219 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 LIPT2A6NK58 231 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 ZNF724A8MTY0 619 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 C16orf97H3BN30 126 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 MRASO14807 208 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 SNX3O60493 162 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 LYPD3O95274 346 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 LGI1O95970 557 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 PLGP00747 810 aaPredicted RBP12.12□□□□□ -0.47
RAB5A-208ENST00000476544 NPPAP01160 153 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 THY1P04216 161 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 FKBP2P26885 142 aaKnown RBP12.12□□□□□ -0.47
RAB5A-208ENST00000476544 LOXP28300 417 aaPredicted RBP12.12□□□□□ -0.47
RAB5A-208ENST00000476544 LSP1P33241 339 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 CPA2P48052 419 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 KCNJ5P48544 419 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 CTBP2P56545 445 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 OR2B6P58173 313 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 RASGEF1BQ0VAM2 473 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 PDK3Q15120 406 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 TSC22D1Q15714 1073 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 EXOC3L2Q2M3D2 409 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 VMACQ2NL98 169 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 ABLIM2Q6H8Q1 611 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 C8orf82Q6P1X6 216 aaPredicted RBP12.12□□□□□ -0.47
RAB5A-208ENST00000476544 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 CCDC80Q76M96 950 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 C11orf65Q8NCR3 313 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 PTDSS2Q9BVG9 487 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 CMTM6Q9NX76 183 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 KLHL28Q9NXS3 571 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 CORO2BQ9UQ03 480 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 EMC9Q9Y3B6 208 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 TESMINQ9Y4I5 508 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 CAPN7Q9Y6W3 813 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 CCDC168Q8NDH2 2452 aa12.12□□□□□ -0.47
RAB5A-208ENST00000476544 GMNCA6NCL1 334 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 CCT8L1PA6NM43 557 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 DEFB108AA8MXU0 73 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 FTCDNL1E5RQL4 147 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 SLC22A2O15244 555 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 KLF4O43474 513 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 OPN1SWP03999 348 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 HRGP04196 525 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 COX4I1P13073 169 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 POU2F1P14859 743 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 CXCR1P25024 350 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 PCGF2P35227 344 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 CPOXP36551 454 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 PEX19P40855 299 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 MAP2K6P52564 334 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 LTBQ06643 244 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 CEACAM7Q14002 265 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 SLC17A1Q14916 467 aa12.11□□□□□ -0.47
RAB5A-208ENST00000476544 C6orf89Q6UWU4 347 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms