RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SWT1Q5T5J6 900 aaKnown RBP26.51■■□□□ 1.83
HOXB3-208ENST00000476342 PLXDC2Q6UX71 529 aa26.51■■□□□ 1.83
HOXB3-208ENST00000476342 TMPPEQ6ZT21 453 aa26.51■■□□□ 1.83
HOXB3-208ENST00000476342 RBM45Q8IUH3 476 aaKnown RBP26.51■■□□□ 1.83
HOXB3-208ENST00000476342 C9orf106Q8NAJ2 232 aa26.51■■□□□ 1.83
HOXB3-208ENST00000476342 ITLN2Q8WWU7 325 aaPredicted RBP26.51■■□□□ 1.83
HOXB3-208ENST00000476342 SDCCAG3Q96C92 435 aa26.51■■□□□ 1.83
HOXB3-208ENST00000476342 OR11A1Q9GZK7 315 aa26.51■■□□□ 1.83
HOXB3-208ENST00000476342 RNF6Q9Y252 685 aa26.51■■□□□ 1.83
HOXB3-208ENST00000476342 MPDZO75970 2070 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 DOPEY1Q5JWR5 2465 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 A0A0G2JNJ9 132 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 CPSF4LA6NMK7 179 aaKnown RBP26.5■■□□□ 1.83
HOXB3-208ENST00000476342 A8MVM7 634 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 TGM6O95932 706 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 TNFRSF1BP20333 461 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 MSX2P35548 267 aaPredicted RBP26.5■■□□□ 1.83
HOXB3-208ENST00000476342 OR2A2Q6IF42 318 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 FKBP9P1Q75LS8 142 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 RNF217Q8TC41 542 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 ADAMTS16Q8TE57 1224 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 ARL5BQ96KC2 179 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 Q9UFV3 132 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 MED12LQ86YW9 2145 aa26.5■■□□□ 1.83
HOXB3-208ENST00000476342 SULT2B1O00204 365 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 ARPC2O15144 300 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 ATP5HO75947 161 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 RCBTB2O95199 551 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 CHRNB4P30926 498 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 OR1E2P47887 323 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 DIO1P49895 249 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 RASSF2P50749 326 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 MYBPHQ13203 477 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 ZNF239Q16600 458 aaKnown RBP26.49■■□□□ 1.83
HOXB3-208ENST00000476342 IFI44LQ53G44 452 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 DEF8Q6ZN54 512 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 VTCN1Q7Z7D3 282 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 GEMIN6Q8WXD5 167 aaKnown RBP26.49■■□□□ 1.83
HOXB3-208ENST00000476342 SLC38A4Q969I6 547 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 NSMCE2Q96MF7 247 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 BTBD10Q9BSF8 475 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 SRXN1Q9BYN0 137 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 POTEKPQ9BYX7 375 aa26.49■■□□□ 1.83
HOXB3-208ENST00000476342 POLR2J2Q9GZM3 115 aaKnown RBP26.49■■□□□ 1.83
HOXB3-208ENST00000476342 POLR2J3Q9H1A7 115 aaKnown RBP26.49■■□□□ 1.83
HOXB3-208ENST00000476342 DCAF13Q9NV06 445 aaKnown RBP26.49■■□□□ 1.83
HOXB3-208ENST00000476342 PMS2P2O95744 297 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 RNF224P0DH78 156 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 STK35Q8TDR2 534 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 SLC7A6OSQ96CW6 309 aaPredicted RBP26.48■■□□□ 1.83
HOXB3-208ENST00000476342 HSH2DQ96JZ2 352 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 THTPAQ9BU02 230 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 MUC13Q9H3R2 512 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 TMIGD3P0DMS9 266 aaPredicted RBP26.48■■□□□ 1.83
HOXB3-208ENST00000476342 C5orf46Q6UWT4 87 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 CCDC71Q8IV32 467 aaPredicted RBP26.48■■□□□ 1.83
HOXB3-208ENST00000476342 CA5BP1Q8WTZ4 195 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 ZHX1-C8orf76Q96EF9 292 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 RNF122Q9H9V4 155 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 TRAPPC4Q9Y296 219 aa26.48■■□□□ 1.83
HOXB3-208ENST00000476342 ZC3H12DA2A288 527 aaKnown RBP26.47■■□□□ 1.83
HOXB3-208ENST00000476342 TRAPPC13A5PLN9 417 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 DNPH1O43598 174 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 CHP2O43745 196 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 PDE5AO76074 875 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 IFNW1P05000 195 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 CDH12P55289 794 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 GTF2IRD2BQ6EKJ0 949 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 GTF2IRD2Q86UP8 949 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 NAXEQ8NCW5 288 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 ACTR3BQ9P1U1 418 aa26.47■■□□□ 1.83
HOXB3-208ENST00000476342 SPTBN1Q01082 2364 aaKnown RBP26.46■■□□□ 1.83
HOXB3-208ENST00000476342 A0A087WUJ7 227 aa26.46■■□□□ 1.83
HOXB3-208ENST00000476342 AQP8O94778 261 aa26.46■■□□□ 1.83
HOXB3-208ENST00000476342 ENPP1P22413 925 aa26.46■■□□□ 1.83
HOXB3-208ENST00000476342 CTSSP25774 331 aa26.46■■□□□ 1.83
HOXB3-208ENST00000476342 IFNA8P32881 189 aa26.46■■□□□ 1.83
HOXB3-208ENST00000476342 IDUAP35475 653 aa26.46■■□□□ 1.83
HOXB3-208ENST00000476342 TAS2R41P59536 307 aa26.46■■□□□ 1.83
HOXB3-208ENST00000476342 INTS12Q96CB8 462 aaKnown RBP26.46■■□□□ 1.83
HOXB3-208ENST00000476342 DNAJA3Q96EY1 480 aa26.46■■□□□ 1.83
HOXB3-208ENST00000476342 ZNF629Q9UEG4 869 aaPredicted RBP26.46■■□□□ 1.83
HOXB3-208ENST00000476342 INTS1Q8N201 2190 aaKnown RBP26.45■■□□□ 1.82
HOXB3-208ENST00000476342 DVL2O14641 736 aa26.45■■□□□ 1.82
HOXB3-208ENST00000476342 CRHP06850 196 aa26.45■■□□□ 1.82
HOXB3-208ENST00000476342 TRIM25Q14258 630 aaKnown RBP26.45■■□□□ 1.82
HOXB3-208ENST00000476342 C1orf140Q5VVS0 124 aa26.45■■□□□ 1.82
HOXB3-208ENST00000476342 FCRLAQ7L513 359 aa26.45■■□□□ 1.82
HOXB3-208ENST00000476342 MCEMP1Q8IX19 187 aa26.45■■□□□ 1.82
HOXB3-208ENST00000476342 GCNT2Q8N0V5 402 aa26.45■■□□□ 1.82
HOXB3-208ENST00000476342 SLC43A2Q8N370 569 aa26.45■■□□□ 1.82
HOXB3-208ENST00000476342 RNF128Q8TEB7 428 aa26.45■■□□□ 1.82
HOXB3-208ENST00000476342 NPIPB7O75200 414 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 OR5F1O95221 314 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 AHSA1O95433 338 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 CLDN14O95500 239 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 PLGP00747 810 aaPredicted RBP26.44■■□□□ 1.82
HOXB3-208ENST00000476342 GPIP06744 558 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 OPRM1P35372 400 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 OR2B6P58173 313 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms