RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 NPR2P20594 1047 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 PRPH2P23942 346 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 CLK1P49759 484 aaKnown RBP13.16□□□□□ -0.3
NME1-206ENST00000475573 UBE2NP61088 152 aaKnown RBP13.16□□□□□ -0.3
NME1-206ENST00000475573 TBRG1Q3YBR2 411 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 ANKRD16Q6P6B7 361 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 POMGNT2Q8NAT1 580 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 ANKRD27Q96NW4 1050 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 ZNF317Q96PQ6 595 aaPredicted RBP13.16□□□□□ -0.3
NME1-206ENST00000475573 FUT8Q9BYC5 575 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 RACGAP1Q9H0H5 632 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 CDC42EP4Q9H3Q1 356 aaKnown RBP13.16□□□□□ -0.3
NME1-206ENST00000475573 GSTO2Q9H4Y5 243 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 FAF1Q9UNN5 650 aaPredicted RBP13.16□□□□□ -0.3
NME1-206ENST00000475573 ZNF281Q9Y2X9 895 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 NOTCH1P46531 2555 aa13.16□□□□□ -0.3
NME1-206ENST00000475573 LYNX1G3V0Z9 82 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 H3BQF6 201 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 EIF1BO60739 113 aaKnown RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 SEC22BO75396 215 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 URI1O94763 535 aaPredicted RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 CSTAP01040 98 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 IGLV1-44P01699 117 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 IGFBP1P08833 259 aaPredicted RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 LYNX1P0DP58 116 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 HKR1P10072 659 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 GAAP10253 952 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 SDC1P18827 310 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 EFNA1P20827 205 aaPredicted RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 CALCRP30988 508 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 THBS4P35443 961 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 GPR6P46095 362 aaPredicted RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 ASMTP46597 345 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 OR2B6P58173 313 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 UBA52P62987 128 aaKnown RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 POU3F1Q03052 451 aaPredicted RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 SLC17A1Q14916 467 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 FAHD2BQ6P2I3 314 aaPredicted RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 C1orf229Q6ZS94 237 aaPredicted RBP13.15□□□□□ -0.3
NME1-206ENST00000475573 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 ZDHHC22Q8N966 263 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 SPATA4Q8NEY3 305 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 OR56A1Q8NGH5 318 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 DCAKDQ8WVC6 231 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 CKAP2Q8WWK9 683 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 DNAJA3Q96EY1 480 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 FAHD2AQ96GK7 314 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 FCRL1Q96LA6 429 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 TSSK3Q96PN8 268 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 ESM1Q9NQ30 184 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 CTPS2Q9NRF8 586 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 TMEM45AQ9NWC5 275 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 NINJ2Q9NZG7 142 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 TMEM216Q9P0N5 145 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 TMEM181Q9P2C4 612 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 ZNF180Q9UJW8 692 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 TRAPPC4Q9Y296 219 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 CCL27Q9Y4X3 112 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 KCNE3Q9Y6H6 103 aa13.15□□□□□ -0.3
NME1-206ENST00000475573 LOC105371242A0A075B767 164 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 ARPC4-TTLL3A0A0A6YYG9 625 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 TMEM129A0AVI4 362 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 SH3PXD2BA1X283 911 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 CRCPO75575 148 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 BCL10O95999 233 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 UBTFL6P0CB48 400 aaPredicted RBP13.14□□□□□ -0.31
NME1-206ENST00000475573 GNG11P61952 73 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 HGFACQ04756 655 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 TP53BP2Q13625 1128 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 ZNF141Q15928 474 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 GRINAQ7Z429 371 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 C1QL2Q7Z5L3 287 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 LCA5Q86VQ0 697 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 CDK20Q8IZL9 346 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 FAM169BQ8N8A8 192 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 OR1K1Q8NGR3 316 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 MTERF3Q96E29 417 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 SLC6A7Q99884 636 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 NAA11Q9BSU3 229 aaPredicted RBP13.14□□□□□ -0.31
NME1-206ENST00000475573 OR11A1Q9GZK7 315 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 TPK1Q9H3S4 243 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 NARFLQ9H6Q4 476 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 GPATCH2Q9NW75 528 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 C1orf109Q9NX04 203 aa13.14□□□□□ -0.31
NME1-206ENST00000475573 IGKV3-15P01624 115 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 ADRA2AP08913 450 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 CCT3P49368 545 aaKnown RBP13.13□□□□□ -0.31
NME1-206ENST00000475573 SLC35A1P78382 337 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 C2orf54Q08AI8 447 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 SLC9B1Q4ZJI4 515 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 ELFN2Q5R3F8 820 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 EIF3MQ7L2H7 374 aaKnown RBP13.13□□□□□ -0.31
NME1-206ENST00000475573 R3HCC1LQ7Z5L2 792 aaKnown RBP13.13□□□□□ -0.31
NME1-206ENST00000475573 BPIFB2Q8N4F0 458 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 CLHC1Q8NHS4 586 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 ZNF563Q8TA94 476 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 PSMA8Q8TAA3 256 aa13.13□□□□□ -0.31
NME1-206ENST00000475573 MAGEE2Q8TD90 523 aaPredicted RBP13.13□□□□□ -0.31
NME1-206ENST00000475573 SDF2Q99470 211 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms