RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CHST2Q9Y4C5 530 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 ICE1Q9Y2F5 2266 aa12.31□□□□□ -0.44
USF1-205ENST00000473969 SPTBN1Q01082 2364 aaKnown RBP12.3□□□□□ -0.44
USF1-205ENST00000473969 A8MVM7 634 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 C19orf84I3L1E1 186 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 DNPH1O43598 174 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 EIF1BO60739 113 aaKnown RBP12.3□□□□□ -0.44
USF1-205ENST00000473969 SHOX2O60902 331 aaPredicted RBP12.3□□□□□ -0.44
USF1-205ENST00000473969 TNFSF13O75888 250 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 PMS2P2O95744 297 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 LGI1O95970 557 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 PNMTP11086 282 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 IDUAP35475 653 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 SLC35A1P78382 337 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 MYBPHQ13203 477 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 DUSP7Q16829 419 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 GLIPR1L2Q4G1C9 344 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 LRRC23Q53EV4 343 aaPredicted RBP12.3□□□□□ -0.44
USF1-205ENST00000473969 STK32CQ86UX6 486 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 LSMEM1Q8N8F7 131 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 LZICQ8WZA0 190 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 DNAJA3Q96EY1 480 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 SLC47A1Q96FL8 570 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 ARL5BQ96KC2 179 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 MCHR1Q99705 422 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 KCTD14Q9BQ13 255 aaPredicted RBP12.3□□□□□ -0.44
USF1-205ENST00000473969 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 RBM24Q9BX46 236 aaKnown RBP12.3□□□□□ -0.44
USF1-205ENST00000473969 POTEKPQ9BYX7 375 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 ALG2Q9H553 416 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 C12orf10Q9HB07 376 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 SPAG4Q9NPE6 437 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 ADPRHL2Q9NX46 363 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 ADA2Q9NZK5 511 aa12.3□□□□□ -0.44
USF1-205ENST00000473969 SPTAN1Q13813 2472 aaKnown RBP12.3□□□□□ -0.44
USF1-205ENST00000473969 ARHGAP21Q5T5U3 1957 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 IGHV3-15A0A0B4J1V0 119 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 MSTNO14793 375 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 SS18L1O75177 396 aaPredicted RBP12.29□□□□□ -0.44
USF1-205ENST00000473969 GCM2O75603 506 aaPredicted RBP12.29□□□□□ -0.44
USF1-205ENST00000473969 GPIP06744 558 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 FESP07332 822 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 GTF2E2P29084 291 aaKnown RBP12.29□□□□□ -0.44
USF1-205ENST00000473969 KDELR2P33947 212 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 KIR2DL2P43627 348 aaPredicted RBP12.29□□□□□ -0.44
USF1-205ENST00000473969 RASGEF1BQ0VAM2 473 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 OR1Q1Q15612 314 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 ALG10BQ5I7T1 473 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 ZNF787Q6DD87 383 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 VWA1Q6PCB0 445 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 ULK3Q6PHR2 472 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 C16orf89Q6UX73 402 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 OR6K3Q8NGY3 331 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 VANGL1Q8TAA9 524 aaPredicted RBP12.29□□□□□ -0.44
USF1-205ENST00000473969 PIGXQ8TBF5 258 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 BCAS4Q8TDM0 211 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 STK35Q8TDR2 534 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 RNF128Q8TEB7 428 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 ABHD3Q8WU67 409 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 TAMM41Q96BW9 452 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 STARD4Q96DR4 205 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 GP6Q9HCN6 339 aa12.29□□□□□ -0.44
USF1-205ENST00000473969 HEATR5AQ86XA9 2040 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 PTPN13Q12923 2485 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 A0A1B0GWA3 101 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 A8MXE2 369 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 M0R3H8 397 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 FMO6PO60774 539 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 AHSA1O95433 338 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 YES1P07947 543 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 CD8BP10966 210 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 CD247P20963 164 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 FPR1P21462 350 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 IFNA8P32881 189 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 CPOXP36551 454 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 TFF3Q07654 80 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 BNIP2Q12982 314 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 KRT72Q14CN4 511 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 NRF1Q16656 503 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 FBXL19-AS1Q494R0 122 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 C1orf140Q5VVS0 124 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 FAM91A1Q658Y4 838 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 C8orf82Q6P1X6 216 aaPredicted RBP12.28□□□□□ -0.44
USF1-205ENST00000473969 C5orf46Q6UWT4 87 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 ATG4DQ86TL0 474 aaPredicted RBP12.28□□□□□ -0.44
USF1-205ENST00000473969 GPR32P1Q8NGA4 272 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 FAM162AQ96A26 154 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 TPD52L3Q96J77 140 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 ARHGDIGQ99819 225 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 ENKD1Q9H0I2 346 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 ARL8BQ9NVJ2 186 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 JKAMPQ9P055 326 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 EMC3Q9P0I2 261 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 KLHL13Q9P2N7 655 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 USP22Q9UPT9 525 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 SH3GLB1Q9Y371 365 aa12.28□□□□□ -0.44
USF1-205ENST00000473969 ZC3H12DA2A288 527 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms