RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PKP4Q99569 1192 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ELF4Q99607 663 aaPredicted RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 WRAP53Q9BUR4 548 aaKnown RBP9.35□□□□□ -0.91
APTX-216ENST00000472896 TEX12Q9BXU0 123 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 CHIAQ9BZP6 476 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 OR51M1Q9H341 326 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 REEP4Q9H6H4 257 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 PRSS16Q9NQE7 514 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 TAS2R5Q9NYW4 299 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 NLGN3Q9NZ94 848 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 ERVK-19Q9WJR5 959 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 RASD1Q9Y272 281 aa9.35□□□□□ -0.91
APTX-216ENST00000472896 TRAV20A0A0B4J274 112 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 TRBV5-4A0A0C4DH59 114 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 A0A1W2PRQ8 180 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 RAB19A4D1S5 217 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 WRBO00258 174 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 PGRMC2O15173 223 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 LRRTM2O43300 516 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SERPINA3P01011 423 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 MT-ND4P03905 459 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 TYRP1P17643 537 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 HOXD9P28356 352 aaPredicted RBP9.34□□□□□ -0.91
APTX-216ENST00000472896 CORO1AP31146 461 aaKnown RBP9.34□□□□□ -0.91
APTX-216ENST00000472896 VEGFCP49767 419 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 PNLIPRP1P54315 467 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 DLX5P56178 289 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 RAE1P78406 368 aaKnown RBP9.34□□□□□ -0.91
APTX-216ENST00000472896 CHIT1Q13231 466 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SYTL3Q4VX76 610 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SFRP5Q5T4F7 317 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 HES5Q5TA89 166 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 ARHGAP40Q5TG30 622 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 ZNF626Q68DY1 528 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 ZNF660Q6AZW8 331 aaPredicted RBP9.34□□□□□ -0.91
APTX-216ENST00000472896 ACSM5Q6NUN0 579 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 TCTN3Q6NUS6 607 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 C1orf94Q6P1W5 598 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SMARCD3Q6STE5 483 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 ZNF322Q6U7Q0 402 aaPredicted RBP9.34□□□□□ -0.91
APTX-216ENST00000472896 SPAG16Q8N0X2 631 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 KRT78Q8N1N4 520 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 IQCF1Q8N6M8 205 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SMIM4Q8WVI0 70 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SPRYD4Q8WW59 207 aaPredicted RBP9.34□□□□□ -0.91
APTX-216ENST00000472896 ZNF354BQ96LW1 612 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 PTDSS2Q9BVG9 487 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SORBS1Q9BX66 1292 aaKnown RBP9.34□□□□□ -0.91
APTX-216ENST00000472896 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 PIGMQ9H3S5 423 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 A4GALTQ9NPC4 353 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SLAMF7Q9NQ25 335 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 MED17Q9NVC6 651 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 MYEF2Q9P2K5 600 aaKnown RBP9.34□□□□□ -0.91
APTX-216ENST00000472896 ATMQ13315 3056 aa9.34□□□□□ -0.91
APTX-216ENST00000472896 SCN8AQ9UQD0 1980 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 PLXNA2O75051 1894 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 A0A1W2PPC4 97 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 A0A1W2PR77 199 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 POM121CA8CG34 1229 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 C5orf58C9J3I9 102 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 FAM227AF5H4B4 570 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 H0YIV9 168 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 SGCEO43556 437 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 EIF1BO60739 113 aaKnown RBP9.33□□□□□ -0.92
APTX-216ENST00000472896 TMEM127O75204 238 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 C6orf47O95873 294 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 RPA2P15927 270 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 ACRV1P26436 265 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 TIA1P31483 386 aaKnown RBP eCLIP9.33□□□□□ -0.92
APTX-216ENST00000472896 EIF1P41567 113 aaKnown RBP9.33□□□□□ -0.92
APTX-216ENST00000472896 MAPK9P45984 424 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 CAPZA2P47755 286 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 CDH11P55287 796 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 HBA1P69905 142 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 DGCR2P98153 550 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 INSM1Q01101 510 aaPredicted RBP9.33□□□□□ -0.92
APTX-216ENST00000472896 IRF8Q02556 426 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 BCL2L1Q07817 233 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 DDX39BQ13838 428 aaKnown RBP9.33□□□□□ -0.92
APTX-216ENST00000472896 MPPED2Q15777 294 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 MAPK14Q16539 360 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 FNDC3BQ53EP0 1204 aaKnown RBP9.33□□□□□ -0.92
APTX-216ENST00000472896 AVPI1Q5T686 147 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 VASNQ6EMK4 673 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 GRHL2Q6ISB3 625 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 SLC25A25Q6KCM7 469 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 C5orf46Q6UWT4 87 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 UBE2R2Q712K3 238 aaPredicted RBP9.33□□□□□ -0.92
APTX-216ENST00000472896 ADIPOR2Q86V24 386 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 BPIFCQ8NFQ6 507 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 OR11G2Q8NGC1 345 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 GLYATL2Q8WU03 294 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 TM6SF2Q9BZW4 377 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 ANKRD19PQ9H560 264 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 EXOSC3Q9NQT5 275 aaKnown RBP9.33□□□□□ -0.92
APTX-216ENST00000472896 GSN-AS1Q9NRJ2 163 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 RASL12Q9NYN1 266 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 TAS2R3Q9NYW6 316 aa9.33□□□□□ -0.92
APTX-216ENST00000472896 SERGEFQ9UGK8 458 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms