RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 MARC2Q969Z3 335 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 SEC22AQ96IW7 307 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 SLC35E1Q96K37 410 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 TBX15Q96SF7 602 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 SMPD3Q9NY59 655 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-209ENST00000472044 KIF25Q9UIL4 384 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 MEMO1Q9Y316 297 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 IFT52Q9Y366 437 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 TIMM10BQ9Y5J6 103 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 COL16A1Q07092 1604 aaPredicted RBP2.63□□□□□ -1.99
PTCD3-209ENST00000472044 MEGF6O75095 1541 aa2.63□□□□□ -1.99
PTCD3-209ENST00000472044 IGKV6D-41A0A0C4DH26 115 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 A0A0J9YXY3 114 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 HELTA6NFD8 242 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 DCTN6O00399 190 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 PFKFB2O60825 505 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 LGI1O95970 557 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 ACTL6AO96019 429 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 DBTP11182 482 aaKnown RBP2.62□□□□□ -1.99
PTCD3-209ENST00000472044 CD1EP15812 388 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 FUT3P21217 361 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 ANXA13P27216 316 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 CALRP27797 417 aaKnown RBP2.62□□□□□ -1.99
PTCD3-209ENST00000472044 GCAP28676 217 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 CALCRP30988 508 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 UGT1A5P35504 534 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 RPL13AP40429 203 aaKnown RBP2.62□□□□□ -1.99
PTCD3-209ENST00000472044 KIR2DS4P43632 304 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 UBE2HP62256 183 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 TNFRSF17Q02223 184 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 ASPHQ12797 758 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 KLRB1Q12918 225 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 GRB7Q14451 532 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 NSUN5P1Q3KNT7 163 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 CASC10Q5T4H9 136 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 GPRC6AQ5T6X5 926 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 C1orf146Q5VVC0 180 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 SLC35F2Q8IXU6 374 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 NKAPP1Q8N9T2 125 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 RAPGEF5Q92565 580 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 CYYR1Q96J86 154 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 ZIM3Q96PE6 472 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 HIST1H4GQ99525 98 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 TMEM43Q9BTV4 400 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 SUDS3Q9H7L9 328 aaPredicted RBP2.62□□□□□ -1.99
PTCD3-209ENST00000472044 VCPKMTQ9H867 229 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 FOLH1BQ9HBA9 442 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 PTBP2Q9UKA9 531 aaKnown RBP2.62□□□□□ -1.99
PTCD3-209ENST00000472044 CDH10Q9Y6N8 788 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 PHF3Q92576 2039 aaKnown RBP2.62□□□□□ -1.99
PTCD3-209ENST00000472044 TTC21BQ7Z4L5 1316 aa2.62□□□□□ -1.99
PTCD3-209ENST00000472044 RPAP1Q9BWH6 1393 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-209ENST00000472044 PLEKHG1Q9ULL1 1385 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 IGHV3OR16-13A0A075B7E8 117 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 IGKV1D-8A0A087WSZ0 117 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 IGHV1OR21-1A0A087WYE8 117 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 PSMB11A5LHX3 300 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 ZNF780AO75290 641 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-209ENST00000472044 MTX2O75431 263 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 HPNP05981 417 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 POU2F1P14859 743 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 DDOSTP39656 456 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 CCT3P49368 545 aaKnown RBP2.61□□□□□ -1.99
PTCD3-209ENST00000472044 APOC4P55056 127 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 ACTR1AP61163 376 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 CSNK1G2P78368 415 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 NCBP1Q09161 790 aaKnown RBP2.61□□□□□ -1.99
PTCD3-209ENST00000472044 IL24Q13007 206 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 VGLL4Q14135 290 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 HERPUD1Q15011 391 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 OR4F3Q6IEY1 312 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 LRRC75A-AS1Q8N1F1 130 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 MFSD9Q8NBP5 474 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 OR51S1Q8NGJ8 323 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 BRSK1Q8TDC3 778 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 MAIP1Q8WWC4 291 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 UBE2E3Q969T4 207 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 TMEM101Q96IK0 257 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 PSKH2Q96QS6 385 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 CCT7Q99832 543 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 REEP4Q9H6H4 257 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 NYAP2Q9P242 653 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 COPS3Q9UNS2 423 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 NEUROG3Q9Y4Z2 214 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 LTBP1Q14766 1721 aa2.61□□□□□ -1.99
PTCD3-209ENST00000472044 PRRC2AP48634 2157 aaKnown RBP2.6□□□□□ -1.99
PTCD3-209ENST00000472044 CLRN2A0PK11 232 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 H0Y9J4 135 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 RAMP3O60896 148 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 SUPT7LO94864 414 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 STAMBPO95630 424 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 NPR2P20594 1047 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 QARSP47897 775 aaKnown RBP2.6□□□□□ -1.99
PTCD3-209ENST00000472044 CEBPDP49716 269 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-209ENST00000472044 DUSP3P51452 185 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-209ENST00000472044 TIMM10P62072 90 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 TLE4Q04727 773 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 ZNF763Q0D2J5 394 aa2.6□□□□□ -1.99
PTCD3-209ENST00000472044 PSG7Q13046 419 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms