RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 SFRP5Q5T4F7 317 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 BLOC1S3Q6QNY0 202 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 SEZ6L2Q6UXD5 910 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 WFDC8Q8IUA0 241 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 ZNF611Q8N823 705 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 STEAP2Q8NFT2 490 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 PMM1Q92871 262 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 CCDC28BQ9BUN5 200 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 BDH2Q9BUT1 245 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 SLAMF8Q9P0V8 285 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 ZNF443Q9Y2A4 671 aaPredicted RBP16.67■□□□□ 0.26
COMMD1-207ENST00000471704 TMED7Q9Y3B3 224 aa16.67■□□□□ 0.26
COMMD1-207ENST00000471704 HIVEP2P31629 2446 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 ZC3H12DA2A288 527 aaKnown RBP16.66■□□□□ 0.26
COMMD1-207ENST00000471704 ZNF724A8MTY0 619 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 HS3ST1O14792 307 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 TMCC2O75069 709 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 SASH3O75995 380 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 ADAP00813 363 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 TFPIP10646 304 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 IMPDH2P12268 514 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 TACR3P29371 465 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 CRISP3P54108 245 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 CSNK2A1P68400 391 aaPredicted RBP16.66■□□□□ 0.26
COMMD1-207ENST00000471704 RGNQ15493 299 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 PAGE3Q5JUK9 113 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 LRIF1Q5T3J3 769 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 HDXQ7Z353 690 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 MTDHQ86UE4 582 aaKnown RBP16.66■□□□□ 0.26
COMMD1-207ENST00000471704 PEX5LQ8IYB4 626 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 OR52P1PQ8NH57 321 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 TACO1Q9BSH4 297 aaKnown RBP16.66■□□□□ 0.26
COMMD1-207ENST00000471704 ADAM19Q9H013 955 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 CCDC167Q9P0B6 97 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 HDGFL3Q9Y3E1 203 aa16.66■□□□□ 0.26
COMMD1-207ENST00000471704 SPIN1Q9Y657 262 aaPredicted RBP16.66■□□□□ 0.26
COMMD1-207ENST00000471704 IGKV3D-15A0A087WSY6 115 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 A0A096LPI6 279 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 CFAP73A6NFT4 308 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 TRIM64A6NGJ6 449 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 TRIM64BA6NI03 449 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-207ENST00000471704 CLIC1O00299 241 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 BMP2P12643 396 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 PRG2P13727 222 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 SLC1A3P43003 542 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 POLR2HP52434 150 aaKnown RBP16.65■□□□□ 0.26
COMMD1-207ENST00000471704 STX1BP61266 288 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 H3F3AP84243 136 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 P2RY6Q15077 328 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 LIN52Q52LA3 116 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 RNF220Q5VTB9 566 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 ADAM5Q6NVV9 412 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 ATG4DQ86TL0 474 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-207ENST00000471704 CCDC103Q8IW40 242 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 CLIP4Q8N3C7 705 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 LILRB1Q8NHL6 650 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-207ENST00000471704 CKAP2Q8WWK9 683 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 MAL2Q969L2 176 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 SPDL1Q96EA4 605 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 VIPAS39Q9H9C1 493 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 INTS9Q9NV88 658 aaKnown RBP16.65■□□□□ 0.26
COMMD1-207ENST00000471704 CALML5Q9NZT1 146 aa16.65■□□□□ 0.26
COMMD1-207ENST00000471704 TRBV5-3A0A0A0MS03 114 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 NR5A2O00482 541 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 HTR3AP46098 478 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 CLK1P49759 484 aaKnown RBP16.64■□□□□ 0.25
COMMD1-207ENST00000471704 GNA13Q14344 377 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 PDK3Q15120 406 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 TAB1Q15750 504 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 Q6ZT83 130 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 TMEM171Q8WVE6 324 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 DYDC1Q8WWB3 177 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 HSD17B8Q92506 261 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 THOC1Q96FV9 657 aaKnown RBP16.64■□□□□ 0.25
COMMD1-207ENST00000471704 IKZF5Q9H5V7 419 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 A4GALTQ9NPC4 353 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 VAPAQ9P0L0 249 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 TMEM181Q9P2C4 612 aa16.64■□□□□ 0.25
COMMD1-207ENST00000471704 A0A0G2JPF8 293 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 HNRNPCL2B2RXH8 293 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 HNRNPCL3B7ZW38 293 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 ZNF208O43345 1280 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 DNPH1O43598 174 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 HNRNPCL1O60812 293 aaKnown RBP16.63■□□□□ 0.25
COMMD1-207ENST00000471704 LYZL6O75951 148 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 CNOT4O95628 575 aaKnown RBP16.63■□□□□ 0.25
COMMD1-207ENST00000471704 THBS1P07996 1170 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 HNRNPCL4P0DMR1 293 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 COX5AP20674 150 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 IGHV1-2P23083 117 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 ATP4BP51164 291 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 OR2B6P58173 313 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 ITGADQ13349 1161 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 CAPRIN1Q14444 709 aaKnown RBP16.63■□□□□ 0.25
COMMD1-207ENST00000471704 NCMAPQ5T1S8 102 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 GOLGA6L1Q8N7Z2 621 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 AKAP1Q92667 903 aaKnown RBP eCLIP16.63■□□□□ 0.25
COMMD1-207ENST00000471704 MAGEB18Q96M61 343 aa16.63■□□□□ 0.25
COMMD1-207ENST00000471704 USB1Q9BQ65 265 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms