RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 A0A0G2JMM0 328 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 LOC100130705A0A1B0GUX0 176 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 A0A1W2PPB8 328 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 A0A1W2PRS3 328 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 TMEM72A0PK05 275 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 C7orf72A4D263 438 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 KIR3DP1A8MWS1 328 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 C1QTNF9BB2RNN3 333 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 H3BML4 177 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 LINC01387J3KSC0 135 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 ETV2O00321 342 aaPredicted RBP8.84□□□□□ -0.99
CCM2-204ENST00000470837 OR7A10O76100 309 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 OR6A2O95222 327 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 SOX14O95416 240 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 ITGB2P05107 769 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 C1QTNF9P0C862 333 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 FUT1P19526 365 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 FUT4P22083 530 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 MST1P26927 711 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 IDUAP35475 653 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 RPS5P46782 204 aaKnown RBP8.84□□□□□ -0.99
CCM2-204ENST00000470837 GSSP48637 474 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 CLK1P49759 484 aaKnown RBP8.84□□□□□ -0.99
CCM2-204ENST00000470837 SMSP52788 366 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 CRISP1P54107 249 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 DLX5P56178 289 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 PRPS1P60891 318 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 IL18R1Q13478 541 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 ANKDD1AQ495B1 522 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 SLC36A3Q495N2 470 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 FAM69AQ5T7M9 428 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 C1orf140Q5VVS0 124 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 CASP12Q6UXS9 341 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 MAMDC2Q7Z304 686 aaPredicted RBP8.84□□□□□ -0.99
CCM2-204ENST00000470837 NANOGNBQ7Z5D8 188 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.84□□□□□ -0.99
CCM2-204ENST00000470837 ADGRG3Q86Y34 549 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 C8orf59Q8N0T1 100 aaPredicted RBP8.84□□□□□ -0.99
CCM2-204ENST00000470837 SLC43A2Q8N370 569 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 FANK1Q8TC84 345 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 TFAP2CQ92754 450 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 SLC25A36Q96CQ1 311 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 SCMH1Q96GD3 660 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 CNBD2Q96M20 576 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 ZNF570Q96NI8 536 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 GABARAPL3Q9BY60 117 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 HES7Q9BYE0 225 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 POTEKPQ9BYX7 375 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 TTTY12Q9BZ98 90 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 EXO5Q9H790 373 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 FKRPQ9H9S5 495 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 MEPEQ9NQ76 525 aaPredicted RBP8.84□□□□□ -0.99
CCM2-204ENST00000470837 DEPPQ9NTK1 212 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 C20orf141Q9NUB4 165 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 FAM118AQ9NWS6 357 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 QPCTLQ9NXS2 382 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 MRPS18CQ9Y3D5 142 aaKnown RBP8.84□□□□□ -0.99
CCM2-204ENST00000470837 CDH10Q9Y6N8 788 aa8.84□□□□□ -0.99
CCM2-204ENST00000470837 A0A087WV48 116 aa8.83□□□□□ -1
CCM2-204ENST00000470837 LRRC3CA6NJW4 275 aa8.83□□□□□ -1
CCM2-204ENST00000470837 FAM166BA8MTA8 275 aa8.83□□□□□ -1
CCM2-204ENST00000470837 SHISA8B8ZZ34 492 aa8.83□□□□□ -1
CCM2-204ENST00000470837 ADAM10O14672 748 aa8.83□□□□□ -1
CCM2-204ENST00000470837 TFECO14948 347 aaPredicted RBP8.83□□□□□ -1
CCM2-204ENST00000470837 NTN1O95631 604 aa8.83□□□□□ -1
CCM2-204ENST00000470837 PEPDP12955 493 aa8.83□□□□□ -1
CCM2-204ENST00000470837 MAKP20794 623 aa8.83□□□□□ -1
CCM2-204ENST00000470837 CHMP24386 653 aa8.83□□□□□ -1
CCM2-204ENST00000470837 NOS3P29474 1203 aa8.83□□□□□ -1
CCM2-204ENST00000470837 SLC6A6P31641 620 aa8.83□□□□□ -1
CCM2-204ENST00000470837 RPL4P36578 427 aaKnown RBP8.83□□□□□ -1
CCM2-204ENST00000470837 PPIAP62937 165 aaKnown RBP8.83□□□□□ -1
CCM2-204ENST00000470837 IL5RAQ01344 420 aa8.83□□□□□ -1
CCM2-204ENST00000470837 KEAP1Q14145 624 aa8.83□□□□□ -1
CCM2-204ENST00000470837 ZNF169Q14929 603 aaPredicted RBP8.83□□□□□ -1
CCM2-204ENST00000470837 SLC10A1Q14973 349 aa8.83□□□□□ -1
CCM2-204ENST00000470837 TBR1Q16650 682 aa8.83□□□□□ -1
CCM2-204ENST00000470837 ZBED5Q49AG3 693 aa8.83□□□□□ -1
CCM2-204ENST00000470837 SYT14P1Q58G82 188 aa8.83□□□□□ -1
CCM2-204ENST00000470837 PDSS1Q5T2R2 415 aa8.83□□□□□ -1
CCM2-204ENST00000470837 ANKRD34AQ69YU3 496 aa8.83□□□□□ -1
CCM2-204ENST00000470837 SLC27A4Q6P1M0 643 aa8.83□□□□□ -1
CCM2-204ENST00000470837 SMARCD3Q6STE5 483 aa8.83□□□□□ -1
CCM2-204ENST00000470837 IGFL3Q6UXB1 125 aa8.83□□□□□ -1
CCM2-204ENST00000470837 ZNF620Q6ZNG0 422 aa8.83□□□□□ -1
CCM2-204ENST00000470837 YRDCQ86U90 279 aaKnown RBP8.83□□□□□ -1
CCM2-204ENST00000470837 MEX3DQ86XN8 651 aaKnown RBP8.83□□□□□ -1
CCM2-204ENST00000470837 FAM109AQ8N4B1 249 aa8.83□□□□□ -1
CCM2-204ENST00000470837 CLDN22Q8N7P3 220 aa8.83□□□□□ -1
CCM2-204ENST00000470837 FAM83FQ8NEG4 500 aaPredicted RBP8.83□□□□□ -1
CCM2-204ENST00000470837 OR2T33Q8NG76 320 aa8.83□□□□□ -1
CCM2-204ENST00000470837 OR6S1Q8NH40 331 aa8.83□□□□□ -1
CCM2-204ENST00000470837 OR51A7Q8NH64 312 aa8.83□□□□□ -1
CCM2-204ENST00000470837 SMPDL3BQ92485 455 aa8.83□□□□□ -1
CCM2-204ENST00000470837 ZHX1-C8orf76Q96EF9 292 aa8.83□□□□□ -1
CCM2-204ENST00000470837 KTI12Q96EK9 354 aaPredicted RBP8.83□□□□□ -1
CCM2-204ENST00000470837 PLEKHA8Q96JA3 519 aa8.83□□□□□ -1
CCM2-204ENST00000470837 SLC38A2Q96QD8 506 aa8.83□□□□□ -1
CCM2-204ENST00000470837 OR5B2Q96R09 309 aa8.83□□□□□ -1
CCM2-204ENST00000470837 MBOAT4Q96T53 435 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms