RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 NKX6-1P78426 367 aaPredicted RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ILKQ13418 452 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 COL13A1Q5TAT6 717 aaPredicted RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 HBMQ6B0K9 141 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 GTF2IRD2BQ6EKJ0 949 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 FAM180BQ6P0A1 224 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ZNF627Q7L945 461 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 B3GNT8Q7Z7M8 397 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 GTF2IRD2Q86UP8 949 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ZNF440Q8IYI8 595 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 MFSD8Q8NHS3 518 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SPIN2AQ99865 258 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SPIN2BQ9BPZ2 258 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 HOXD1Q9GZZ0 328 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 NANSQ9NR45 359 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SERTAD3Q9UJW9 196 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 H0YIG0 161 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 EML2O95834 649 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 PDGFAP04085 211 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 MAP2K4P45985 399 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 EMX1Q04741 257 aaPredicted RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 CNIH2Q6PI25 160 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 GSG1LQ6UXU4 331 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 CD300LFQ8TDQ1 290 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ELMOD3Q96FG2 381 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 C19orf12Q9NSK7 152 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 IMPA2O14732 288 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 UBL3O95164 117 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 MC2RQ01718 297 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 DCST2Q5T1A1 773 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 AADACL4Q5VUY2 407 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 OR6K6Q8NGW6 343 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 OIT3Q8WWZ8 545 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 TESQ9UGI8 421 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 KIF25Q9UIL4 384 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 RBM7Q9Y580 266 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 TRPM6Q9BX84 2022 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 TRAV6A0A075B6T7 132 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 A0A1W2PQ09 198 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 FMO6PO60774 539 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SLC22A5O76082 557 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 FCER2P06734 321 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SSX2Q16385 188 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ALG10Q5BKT4 473 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 FOXB2Q5VYV0 432 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SLC30A6Q6NXT4 461 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SSX6Q7RTT6 188 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 PXKQ7Z7A4 578 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SNX29P2Q8IUI4 249 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 YIPF7Q8N8F6 280 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 FANK1Q8TC84 345 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SLC7A6Q92536 515 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 URM1Q9BTM9 101 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 RAB33BQ9H082 229 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 DNAJC27Q9NZQ0 273 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 A0A1B0GTW7 788 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 BAMBIQ13145 260 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ARFRP1Q13795 201 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 PEA15Q15121 130 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 BAK1Q16611 211 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 UBE2UQ5VVX9 321 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SLC6A19Q695T7 634 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 AWAT2Q6E213 333 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 GATAD2BQ8WXI9 593 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ZNF559Q9BR84 538 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 NELFAQ9H3P2 528 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 DUSP21Q9H596 190 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 NTMQ9P121 344 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SRPK3Q9UPE1 567 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 TCF20Q9UGU0 1960 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 LOC105369274A0A096LPK9 316 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 LOC102723532A0A0G2JNH3 316 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 PRKRAO75569 313 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 TSPAN15O95858 294 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SMIM10L1P0DMW3 83 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 RUNX2Q13950 521 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 C3orf38Q5JPI3 329 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 LYSMD4Q5XG99 296 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 OR4N4Q8N0Y3 316 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 FBLIM1Q8WUP2 373 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SLC35B4Q969S0 331 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SMIM10Q96HG1 83 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ZNF681Q96N22 645 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 TGM7Q96PF1 710 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 MFFQ9GZY8 342 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 APMAPQ9HDC9 416 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 RHCGQ9UBD6 479 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 ZNF443Q9Y2A4 671 aaPredicted RBP6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 SIT1Q9Y3P8 196 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 NPFFR2Q9Y5X5 522 aa6.48□□□□□ -1.37
GAPVD1-215ENST00000470056 POLR1CO15160 346 aaPredicted RBP6.47□□□□□ -1.37
GAPVD1-215ENST00000470056 CBLP22681 906 aa6.47□□□□□ -1.37
GAPVD1-215ENST00000470056 GPR3P46089 330 aa6.47□□□□□ -1.37
GAPVD1-215ENST00000470056 DUSP7Q16829 419 aa6.47□□□□□ -1.37
GAPVD1-215ENST00000470056 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.47□□□□□ -1.374e-6■■■□□ 15.4
GAPVD1-215ENST00000470056 CMIPQ8IY22 773 aa6.47□□□□□ -1.37
GAPVD1-215ENST00000470056 ACOT11Q8WXI4 607 aaPredicted RBP6.47□□□□□ -1.37
GAPVD1-215ENST00000470056 TMEM203Q969S6 136 aa6.47□□□□□ -1.37
GAPVD1-215ENST00000470056 CENPOQ9BU64 300 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms