RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 NAXEQ8NCW5 288 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 ASB5Q8WWX0 329 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 SLC38A4Q969I6 547 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 SLC7A6OSQ96CW6 309 aaPredicted RBP10.71□□□□□ -0.69
VPS13D-204ENST00000469054 SLC47A1Q96FL8 570 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 ZFP3Q96NJ6 502 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 SRXN1Q9BYN0 137 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 POTEKPQ9BYX7 375 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 PRRG4Q9BZD6 226 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 OR11A1Q9GZK7 315 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 DCAF13Q9NV06 445 aaKnown RBP10.71□□□□□ -0.69
VPS13D-204ENST00000469054 SELENONQ9NZV5 590 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 RPS6KA6Q9UK32 745 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 RNF6Q9Y252 685 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 SNX13Q9Y5W8 968 aa10.71□□□□□ -0.69
VPS13D-204ENST00000469054 HIVEP3Q5T1R4 2406 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 A0A087WUJ7 227 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 ELOA3DA6NLF2 546 aaPredicted RBP10.7□□□□□ -0.7
VPS13D-204ENST00000469054 CPSF4LA6NMK7 179 aaKnown RBP10.7□□□□□ -0.7
VPS13D-204ENST00000469054 A8MVM7 634 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 SULT2B1O00204 365 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 ATP5HO75947 161 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 AQP8O94778 261 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 PMS2P2O95744 297 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 FCGR2AP12318 317 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 CTSSP25774 331 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 CHRNB4P30926 498 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 DIO1P49895 249 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 CDH12P55289 794 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 CSNK2A1P68400 391 aaPredicted RBP10.7□□□□□ -0.7
VPS13D-204ENST00000469054 ELOA3BQ3SY89 546 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 IFI44LQ53G44 452 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 SWT1Q5T5J6 900 aaKnown RBP10.7□□□□□ -0.7
VPS13D-204ENST00000469054 OR2A2Q6IF42 318 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 PPP4R4Q6NUP7 873 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 DEF8Q6ZN54 512 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 FKBP9P1Q75LS8 142 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 LSRQ86X29 649 aaPredicted RBP10.7□□□□□ -0.7
VPS13D-204ENST00000469054 ELOA3Q8NG57 546 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 STK35Q8TDR2 534 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 ADAMTS16Q8TE57 1224 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 ROBO4Q8WZ75 1007 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 INTS12Q96CB8 462 aaKnown RBP10.7□□□□□ -0.7
VPS13D-204ENST00000469054 HSH2DQ96JZ2 352 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 NSMCE2Q96MF7 247 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 BTBD10Q9BSF8 475 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 RNF122Q9H9V4 155 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 ZNF629Q9UEG4 869 aaPredicted RBP10.7□□□□□ -0.7
VPS13D-204ENST00000469054 SAMD4AQ9UPU9 718 aaKnown RBP10.7□□□□□ -0.7
VPS13D-204ENST00000469054 TRAPPC4Q9Y296 219 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 MYO7BQ6PIF6 2116 aa10.7□□□□□ -0.7
VPS13D-204ENST00000469054 TRAPPC13A5PLN9 417 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 ARPC2O15144 300 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 DNPH1O43598 174 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 NPIPB7O75200 414 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 PDE5AO76074 875 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 CLDN14O95500 239 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 IL18BPO95998 194 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 THY1P04216 161 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 IFNW1P05000 195 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 TMIGD3P0DMS9 266 aaPredicted RBP10.69□□□□□ -0.7
VPS13D-204ENST00000469054 IMPDH2P12268 514 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 ENPP1P22413 925 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 OPRM1P35372 400 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 RASSF2P50749 326 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 OR2B6P58173 313 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 EGR4Q05215 589 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 TRIM25Q14258 630 aaKnown RBP10.69□□□□□ -0.7
VPS13D-204ENST00000469054 CDSNQ15517 529 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 ZNF239Q16600 458 aaKnown RBP10.69□□□□□ -0.7
VPS13D-204ENST00000469054 C1orf140Q5VVS0 124 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 GTF2IRD2BQ6EKJ0 949 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 GTF2IRD2Q86UP8 949 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 TSPYL5Q86VY4 417 aaPredicted RBP10.69□□□□□ -0.7
VPS13D-204ENST00000469054 LIX1LQ8IVB5 337 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 LILRB4Q8NHJ6 448 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 RNF217Q8TC41 542 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 CA5BP1Q8WTZ4 195 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 GEMIN6Q8WXD5 167 aaKnown RBP10.69□□□□□ -0.7
VPS13D-204ENST00000469054 DNAJA3Q96EY1 480 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 CLPTM1LQ96KA5 538 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 AMBRA1Q9C0C7 1298 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 POLR2J2Q9GZM3 115 aaKnown RBP10.69□□□□□ -0.7
VPS13D-204ENST00000469054 POLR2J3Q9H1A7 115 aaKnown RBP10.69□□□□□ -0.7
VPS13D-204ENST00000469054 MUC13Q9H3R2 512 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 ACTR3BQ9P1U1 418 aa10.69□□□□□ -0.7
VPS13D-204ENST00000469054 IGKV1D-42A0A075B6H8 117 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 IGHV3-15A0A0B4J1V0 119 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 DVL2O14641 736 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 CHP2O43745 196 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 DNAJC8O75937 253 aaPredicted RBP10.68□□□□□ -0.7
VPS13D-204ENST00000469054 PRKD3O94806 890 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 OR5F1O95221 314 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 LYPD3O95274 346 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 CRHP06850 196 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 FPR1P21462 350 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 IDUAP35475 653 aa10.68□□□□□ -0.7
VPS13D-204ENST00000469054 AGFG1P52594 562 aaKnown RBP10.68□□□□□ -0.7
VPS13D-204ENST00000469054 TAS2R41P59536 307 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms