RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MAP2K4P45985 399 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 EGR4Q05215 589 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 SNTA1Q13424 505 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 ATP1A4Q13733 1029 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 ZNF74Q16587 644 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 BORAQ6PGQ7 559 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 ASCL5Q7RTU5 278 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 GALNT15Q8N3T1 639 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 ST8SIA1Q92185 356 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 FGF11Q92914 225 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 KTI12Q96EK9 354 aaPredicted RBP17.24■□□□□ 0.35
SMC4-209ENST00000468653 SIGLEC11Q96RL6 698 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 RYDENQ9NUL5 291 aaKnown RBP17.24■□□□□ 0.35
SMC4-209ENST00000468653 HPF1Q9NWY4 346 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 BAIAP2Q9UQB8 552 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 TMED7Q9Y3B3 224 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 PCDHGB6Q9Y5F9 930 aa17.24■□□□□ 0.35
SMC4-209ENST00000468653 SUSD5O60279 629 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 C21orf33P30042 268 aaPredicted RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 FHL1Q13642 323 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 SLC35F1Q5T1Q4 408 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 PRAMEF20Q5VT98 475 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 SIRT6Q8N6T7 355 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 ANKK1Q8NFD2 765 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 SECISBP2Q96T21 854 aaKnown RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 CPNE5Q9HCH3 593 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 NANSQ9NR45 359 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 IL17BQ9UHF5 180 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 ZFHX2Q9C0A1 2572 aaPredicted RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 RIF1Q5UIP0 2472 aaKnown RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 IGLV3-32A0A0A0MS00 114 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 TM4SF5O14894 197 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 SLC2A10O95528 541 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 PPP1R3DO95685 299 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 DBTP11182 482 aaKnown RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 PIPP12273 146 aaPredicted RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 PRKCAP17252 672 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 SLC15A1P46059 708 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 ZNF41P51814 821 aaPredicted RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 FOXK2Q01167 660 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 MVKQ03426 396 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 ZNF91Q05481 1191 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 ADGRG3Q86Y34 549 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 FAR1Q8WVX9 515 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 RORBQ92753 470 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 MUL1Q969V5 352 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 KIAA1143Q96AT1 154 aaPredicted RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 LHPPQ9H008 270 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 RBM38Q9H0Z9 239 aaKnown RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 GPN2Q9H9Y4 310 aaPredicted RBP17.23■□□□□ 0.35
SMC4-209ENST00000468653 VDAC3Q9Y277 283 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 CEPT1Q9Y6K0 416 aa17.23■□□□□ 0.35
SMC4-209ENST00000468653 TRAV36DV7A0A075B6V5 113 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 TMEM72A0PK05 275 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 CDRT15L2A8MXV6 281 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 ZNF99A8MXY4 864 aaPredicted RBP17.22■□□□□ 0.35
SMC4-209ENST00000468653 B4DXG7 233 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 PRODHO43272 600 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 HIST1H2ABP04908 130 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 NOS3P29474 1203 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 RPL4P36578 427 aaKnown RBP17.22■□□□□ 0.35
SMC4-209ENST00000468653 RPS5P46782 204 aaKnown RBP17.22■□□□□ 0.35
SMC4-209ENST00000468653 MASP1P48740 699 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 TMEM44Q2T9K0 475 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 SLC22A10Q63ZE4 541 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 H3F3CQ6NXT2 135 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 ARSKQ6UWY0 536 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 HIST3H2AQ7L7L0 130 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 LIPHQ8WWY8 451 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 HIST1H2ACQ93077 130 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 TAAR8Q969N4 342 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 OTULINQ96BN8 352 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 IP6K3Q96PC2 410 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 MOGAT1Q96PD6 335 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 ACOT13Q9NPJ3 140 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 WDR70Q9NW82 654 aa17.22■□□□□ 0.35
SMC4-209ENST00000468653 H2AFY2Q9P0M6 372 aaPredicted RBP17.22■□□□□ 0.35
SMC4-209ENST00000468653 PCNX3Q9H6A9 2034 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 A8MVM7 634 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 KDM4EB2RXH2 506 aaPredicted RBP17.21■□□□□ 0.35
SMC4-209ENST00000468653 INMTO95050 263 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 WISP1O95388 367 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 PEPDP12955 493 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 PRPS1P60891 318 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 TUBA3CQ13748 450 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 B3GNTL1Q67FW5 361 aaPredicted RBP17.21■□□□□ 0.35
SMC4-209ENST00000468653 GTF2IRD2BQ6EKJ0 949 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 TMEM81Q6P7N7 255 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 GTF2IRD2Q86UP8 949 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 CLVS1Q8IUQ0 354 aaPredicted RBP17.21■□□□□ 0.35
SMC4-209ENST00000468653 OR4K17Q8NGC6 315 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 OR13F1Q8NGS4 319 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 ADAMTS17Q8TE56 1095 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 ADAMTS14Q8WXS8 1223 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 RFKQ969G6 155 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 THOC3Q96J01 351 aaKnown RBP17.21■□□□□ 0.35
SMC4-209ENST00000468653 ERMAPQ96PL5 475 aaPredicted RBP17.21■□□□□ 0.35
SMC4-209ENST00000468653 CMC2Q9NRP2 79 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms