RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 RHNO1Q9BSD3 238 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 UCK2Q9BZX2 261 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 TRIM45Q9H8W5 580 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 C12orf10Q9HB07 376 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 MMP25Q9NPA2 562 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 CNIH4Q9P003 139 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 CRNNQ9UBG3 495 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 SLC35A3Q9Y2D2 325 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 MRPS18BQ9Y676 258 aaKnown RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 IGKV1D-42A0A075B6H8 117 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 C9J4A7 227 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 REM1O75628 298 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 OR2J2O76002 312 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 TNFSF15O95150 251 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 TNFAIP8O95379 198 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 CRYZL1O95825 349 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 NAGAP17050 411 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 CRHBPP24387 322 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 MAPK3P27361 379 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 TAGLN2P37802 199 aaKnown RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 GDI2P50395 445 aaKnown RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 CRISP1P54107 249 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 ALDH6A1Q02252 535 aaKnown RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 MAD2L1BPQ15013 274 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 TOMM34Q15785 309 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 SMN1Q16637 294 aaKnown RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF791Q3KP31 576 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 FOXB2Q5VYV0 432 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 C12orf73Q69YU5 71 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 NRMQ8IXM6 262 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 C8orf59Q8N0T1 100 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 TAGAPQ8N103 731 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 HDAC2Q92769 488 aaKnown RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 SLC38A4Q969I6 547 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 C3orf49Q96BT1 292 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 NPAS1Q99742 590 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 ENKD1Q9H0I2 346 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 ATP13A2Q9NQ11 1180 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 C19orf25Q9UFG5 118 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-208ENST00000468300 SLC13A4Q9UKG4 626 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 AKAP13Q12802 2813 aa7.54□□□□□ -1.2
BRCA1-208ENST00000468300 CHP2O43745 196 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 SSX5O60225 188 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 SOX14O95416 240 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ECDO95905 644 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ADRA2AP08913 450 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 FBXO45P0C2W1 286 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 CSRP1P21291 193 aaKnown RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 FOLR3P41439 243 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ESRRGP62508 458 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 CDK5Q00535 292 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 PRKCDQ05655 676 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 KCTD21Q4G0X4 260 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 C6orf141Q5SZD1 244 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 BICRALQ6AI39 1079 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 NDUFAF7Q7L592 441 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 MRGPREQ86SM8 312 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZBTB46Q86UZ6 589 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 DTX1Q86Y01 620 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ADAD1Q96M93 576 aaKnown RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 RASL10BQ96S79 203 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 LAT2Q9GZY6 243 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ADAM19Q9H013 955 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 EGLN3Q9H6Z9 239 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZBTB20Q9HC78 741 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 SH2D2AQ9NP31 389 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ASCL3Q9NQ33 180 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 DLL3Q9NYJ7 618 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 FARSAQ9Y285 508 aaKnown RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 DPPA5A6NC42 116 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF264O43296 627 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZFAND5O76080 213 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 OR6B1O95007 311 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 IL12BP29460 328 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 NOS3P29474 1203 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 HLCSP50747 726 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 CTBP2P56545 445 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 PSPHP78330 225 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 TSPAN31Q12999 210 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZSWIM7Q19AV6 140 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 HLA-DQA1Q5Y7H0 255 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 GPR139Q6DWJ6 353 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 H3F3CQ6NXT2 135 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ATG4DQ86TL0 474 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 OR56B2PQ8NGI1 322 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 RHOXF1Q8NHV9 184 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 SIGLEC11Q96RL6 698 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 PROK2Q9HC23 129 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF160Q9HCG1 818 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 PAQR5Q9NXK6 330 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ORC6Q9Y5N6 252 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 GMPPBQ9Y5P6 360 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 HSPE1-MOB4S4R3N1 261 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 EP300Q09472 2414 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZFHX2Q9C0A1 2572 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 SCDO00767 359 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ANGPTL1O95841 491 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 CLPTM1O96005 669 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 FPR3P25089 353 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 GPR4P46093 362 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms