RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 ARPC2O15144 300 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 SS18L1O75177 396 aaPredicted RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 STAMBPO95630 424 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 AK1P00568 194 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 PLGP00747 810 aaPredicted RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 NUDT7P0C024 238 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 CTBP2P56545 445 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 PCBP3P57721 371 aaKnown RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 RPS26P62854 115 aaKnown RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 CDK6Q00534 326 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 ZNF155Q12901 538 aaPredicted RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 ZNHIT3Q15649 155 aaPredicted RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 DECR1Q16698 335 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 ATAD3BQ5T9A4 648 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 INTS11Q5TA45 600 aaKnown RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 ADAM5Q6NVV9 412 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 TNFAIP8L2Q6P589 184 aaPredicted RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 PODNL1Q6PEZ8 512 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 BEND4Q6ZU67 534 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 DHFR2Q86XF0 187 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 AQP12AQ8IXF9 295 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 SLC16A11Q8NCK7 471 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 HIPK4Q8NE63 616 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 ADAMTS15Q8TE58 950 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 DUSP19Q8WTR2 217 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 SLC38A5Q8WUX1 472 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 WDR60Q8WVS4 1066 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 JADE3Q92613 823 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 AKAP1Q92667 903 aaKnown RBP eCLIP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 PMM1Q92871 262 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 TRNT1Q96Q11 434 aaKnown RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 OR7D2Q96RA2 312 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 PRRG4Q9BZD6 226 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 ACTR6Q9GZN1 396 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 PCDHAC1Q9H158 963 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 DENND2DQ9H6A0 471 aaPredicted RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 BCL2L10Q9HD36 194 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 GLRX2Q9NS18 164 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 EXD2Q9NVH0 621 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 FLRT3Q9NZU0 649 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 MRTO4Q9UKD2 239 aaKnown RBP14.03□□□□□ -0.16
TSSC4-208ENST00000467308 USP22Q9UPT9 525 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 LAMP3Q9UQV4 416 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 GPR52Q9Y2T5 361 aa14.03□□□□□ -0.16
TSSC4-208ENST00000467308 TMEM247A6NEH6 219 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 RNF212BA8MTL3 300 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 RNF223E7ERA6 249 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 OVOL3O00110 214 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 CXCR6O00574 342 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 GSTA4O15217 222 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 TLX2O43763 284 aaPredicted RBP14.02□□□□□ -0.17
TSSC4-208ENST00000467308 GMNNO75496 209 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 IFNA2P01563 188 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 ALOX5P09917 674 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 OR12D1P0DN82 309 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 ACP2P11117 423 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 PSMB1P20618 241 aaKnown RBP14.02□□□□□ -0.17
TSSC4-208ENST00000467308 MSX2P35548 267 aaPredicted RBP14.02□□□□□ -0.17
TSSC4-208ENST00000467308 EIF1AXP47813 144 aaKnown RBP14.02□□□□□ -0.17
TSSC4-208ENST00000467308 SLC6A8P48029 635 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 PSMD4P55036 377 aaKnown RBP14.02□□□□□ -0.17
TSSC4-208ENST00000467308 ELF3P78545 371 aaPredicted RBP14.02□□□□□ -0.17
TSSC4-208ENST00000467308 C17orf67Q0P5P2 114 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 SCARB2Q14108 478 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 MAPK11Q15759 364 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 GLYATQ6IB77 296 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 HMBOX1Q6NT76 420 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 REEP3Q6NUK4 255 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 STK32CQ86UX6 486 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 XAGE5Q8WWM1 108 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 TRMT61AQ96FX7 289 aaKnown RBP14.02□□□□□ -0.17
TSSC4-208ENST00000467308 PIF1Q9H611 641 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 EQTNQ9NQ60 294 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 POLE3Q9NRF9 147 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 CALML5Q9NZT1 146 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 EGFL7Q9UHF1 273 aa14.02□□□□□ -0.17
TSSC4-208ENST00000467308 TCRBV3S1A0A5B6 114 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 EIF1AYO14602 144 aaKnown RBP14.01□□□□□ -0.17
TSSC4-208ENST00000467308 IL33O95760 270 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 TP53P04637 393 aaPredicted RBP14.01□□□□□ -0.17
TSSC4-208ENST00000467308 ZNF17P17021 662 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 HOXB6P17509 224 aaKnown RBP14.01□□□□□ -0.17
TSSC4-208ENST00000467308 IDUAP35475 653 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 KPNB1Q14974 876 aaKnown RBP14.01□□□□□ -0.17
TSSC4-208ENST00000467308 DUSP5Q16690 384 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 ARHGAP11BQ3KRB8 267 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 LRRC74BQ6ZQY2 392 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 PATL1Q86TB9 770 aaKnown RBP14.01□□□□□ -0.17
TSSC4-208ENST00000467308 MARCH3Q86UD3 253 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 HIPK1Q86Z02 1210 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 WFDC8Q8IUA0 241 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 OR5D16Q8NGK9 328 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 RAB8BQ92930 207 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 MAL2Q969L2 176 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 DUS3LQ96G46 650 aaKnown RBP14.01□□□□□ -0.17
TSSC4-208ENST00000467308 RNF145Q96MT1 663 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 BTBD2Q9BX70 525 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 REG4Q9BYZ8 158 aa14.01□□□□□ -0.17
TSSC4-208ENST00000467308 HHATLQ9HCP6 504 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms