RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 ZNF407Q9C0G0 2248 aa11.96□□□□□ -0.49
PDCD11-202ENST00000466959 IGKV1D-42A0A075B6H8 117 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 TRBV4-1A0A0J9YWV2 114 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 SH3PXD2BA1X283 911 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 ENO4A6NNW6 628 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 A8MVM7 634 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 H0Y3Z8 333 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 H3BML4 177 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 MGRN1O60291 552 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 BAG2O95816 211 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 PEPDP12955 493 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 ANPEPP15144 967 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 POU3F2P20265 443 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-202ENST00000466959 FPR1P21462 350 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 DNAJA1P31689 397 aaKnown RBP11.95□□□□□ -0.5
PDCD11-202ENST00000466959 CLK1P49759 484 aaKnown RBP11.95□□□□□ -0.5
PDCD11-202ENST00000466959 UGT2B15P54855 530 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 FOXD4Q12950 439 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-202ENST00000466959 EXOC3L2Q2M3D2 409 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 DCST1Q5T197 706 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 C5orf46Q6UWT4 87 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 ZNF730Q6ZMV8 503 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 FAR1Q8WVX9 515 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 ABTB1Q969K4 478 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-202ENST00000466959 DDIT4LQ96D03 193 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 SNRNP40Q96DI7 357 aaKnown RBP11.95□□□□□ -0.5
PDCD11-202ENST00000466959 GPR137Q96N19 417 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 ALPK1Q96QP1 1244 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 SLC19A3Q9BZV2 496 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 C6orf203Q9P0P8 240 aaPredicted RBP11.95□□□□□ -0.5
PDCD11-202ENST00000466959 TMCC3Q9ULS5 477 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 MED31Q9Y3C7 131 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 U3KQV3 271 aa11.95□□□□□ -0.5
PDCD11-202ENST00000466959 DNAJC13O75165 2243 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 MED12Q93074 2177 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 A0A087WUU8 490 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 ZC3H12DA2A288 527 aaKnown RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 GJE1A6NN92 205 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 AQP7O14520 342 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 NPIPB7O75200 414 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 E2F6O75461 281 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 WISP2O76076 250 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 TFPIP10646 304 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 BMP7P18075 431 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 SHC1P29353 583 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 LHX2P50458 406 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 TDGF1P3P51864 188 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 IST1P53990 364 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 EGR4Q05215 589 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 CRYZQ08257 329 aaKnown RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 PPP1R8Q12972 351 aaKnown RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 RIPK1Q13546 671 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 SEC23BQ15437 767 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 BCL2A1Q16548 175 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 KRTCAP3Q53RY4 240 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 SYT14P1Q58G82 188 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 VASNQ6EMK4 673 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 MBOAT2Q6ZWT7 520 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 TMEM179BQ7Z7N9 219 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 LSRQ86X29 649 aaPredicted RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 RNF113BQ8IZP6 322 aaKnown RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 GHDCQ8N2G8 530 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 LINC00471Q8N535 108 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 ATP6V1C2Q8NEY4 427 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 OR5K1Q8NHB7 308 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 SMPDL3BQ92485 455 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 NRBF2Q96F24 287 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 KLHL15Q96M94 604 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 BARD1Q99728 777 aaKnown RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 SLX1AQ9BQ83 275 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 POTEKPQ9BYX7 375 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 OR11A1Q9GZK7 315 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 TMEM185BQ9H7F4 350 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 ASF1BQ9NVP2 202 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 STX18Q9P2W9 335 aaKnown RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 SPRR3Q9UBC9 169 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 USP9YO00507 2555 aaPredicted RBP11.94□□□□□ -0.5
PDCD11-202ENST00000466959 KIAA1549Q9HCM3 1950 aa11.94□□□□□ -0.5
PDCD11-202ENST00000466959 TRAV36DV7A0A075B6V5 113 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 HTR3EA5X5Y0 456 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 TTLL8A6PVC2 850 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 PIP5K1CO60331 668 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 CCNB2O95067 398 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 AHSA1O95433 338 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 IGF2P01344 180 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 ZNF708P17019 499 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 PTNP21246 168 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 SFTPDP35247 375 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 STARP49675 285 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 CTBP2P56545 445 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 MICAQ29983 383 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 TMEM176BQ3YBM2 270 aaPredicted RBP11.93□□□□□ -0.5
PDCD11-202ENST00000466959 C1orf140Q5VVS0 124 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 ARHGAP11AQ6P4F7 1023 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 SHQ1Q6PI26 577 aaKnown RBP11.93□□□□□ -0.5
PDCD11-202ENST00000466959 TBPL2Q6SJ96 375 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 RRM2BQ7LG56 351 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 GGNQ86UU5 652 aa11.93□□□□□ -0.5
PDCD11-202ENST00000466959 P3H2Q8IVL5 708 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms