RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PPIL3Q9H2H8 161 aaKnown RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 IGSF5Q9NSI5 407 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 PLCXD1Q9NUJ7 323 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 ASB4Q9Y574 426 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 GABRR3A8MPY1 467 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 F8W036 122 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 UBFD1O14562 309 aaKnown RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 INHBCP55103 352 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 RAB38P57729 211 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 RPL11P62913 178 aaKnown RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 BLOC1S1P78537 153 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SLC6A19Q695T7 634 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 LINC00696Q6ZRV3 163 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 AAED1Q7RTV5 226 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 MISPQ8IVT2 679 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 SCCPDHQ8NBX0 429 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 MIB2Q96AX9 1013 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 PGAP3Q96FM1 320 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 FOXN4Q96NZ1 517 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 EGLN3Q9H6Z9 239 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 RDH14Q9HBH5 336 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 TEX10Q9NXF1 929 aaPredicted RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 OR6C2Q9NZP2 312 aa8.14□□□□□ -1.11
HPS4-209ENST00000466781 NXT1Q9UKK6 140 aaKnown RBP8.14□□□□□ -1.11
HPS4-209ENST00000466781 RREB1Q92766 1687 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ANTXRLA6NF34 631 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 KDM4EB2RXH2 506 aaPredicted RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 FANCGO15287 622 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 DDAH2O95865 285 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 PVRP15151 417 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ENPP1P22413 925 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 CTBSQ01459 385 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 IKZF1Q13422 519 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 GPR18Q14330 331 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 C2orf76Q3KRA6 126 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 FAM217AQ8IXS0 508 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 OR6T1Q8NGN1 323 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 NEIL2Q969S2 332 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 BPIFA2Q96DR5 249 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 PIGQQ9BRB3 760 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 C1QTNF2Q9BXJ5 285 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 NMNAT2Q9BZQ4 307 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 TRAV27A0A087WT01 109 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 KLRC4-KLRK1H3BQV0 150 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 OR1D4P47884 311 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 AFF3P51826 1226 aaKnown RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 SLC14A1Q13336 389 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ZNF585AQ6P3V2 769 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 B3GNT9Q6UX72 402 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ADIPOR2Q86V24 386 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ZNF595Q8IYB9 648 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 TEX19Q8NA77 164 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 MFSD9Q8NBP5 474 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ZNF566Q969W8 418 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 BSCL2Q96G97 398 aaPredicted RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 ZC3HAV1LQ96H79 300 aaKnown RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 TSSK2Q96PF2 358 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 MACROD1Q9BQ69 325 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 CMSS1Q9BQ75 279 aaKnown RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 GAREM1Q9H706 876 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 CACNG2Q9Y698 323 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 SSC5DA1L4H1 1573 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ZNF254O75437 659 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 DEFA4P12838 97 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 PRKACBP22694 351 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 PTPN6P29350 595 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 STT3AP46977 705 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 GSK3AP49840 483 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 SH3BP2P78314 561 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 SLC35A1P78382 337 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 LTB4RQ15722 352 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 BATFQ16520 125 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 FAM69AQ5T7M9 428 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 KCNIP4Q6PIL6 250 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 PRSS48Q7RTY5 328 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 PRICKLE2Q7Z3G6 844 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 NAA40Q86UY6 237 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ZNF687Q8N1G0 1237 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 SUMF2Q8NBJ7 301 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 OR7G3Q8NG95 312 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ZFPM2Q8WW38 1151 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 TIMD4Q96H15 378 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 UHRF2Q96PU4 802 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 WDR83Q9BRX9 315 aaKnown RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 HHLA2Q9UM44 414 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 ATG4BQ9Y4P1 393 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 SULT1B1O43704 296 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 TK1P04183 234 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 F3P13726 295 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 CPMP14384 443 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 GSCP56915 257 aaPredicted RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 TAS2R46P59540 309 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 TAS2R30P59541 319 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 YPEL5P62699 121 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 AKR1C1Q04828 323 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 PIN1Q13526 163 aaPredicted RBP8.13□□□□□ -1.11
HPS4-209ENST00000466781 OR1Q1Q15612 314 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 FXNQ16595 210 aa8.13□□□□□ -1.11
HPS4-209ENST00000466781 TBC1D28Q2M2D7 210 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms