RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CADM2Q8N3J6 435 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 NEUROG1Q92886 237 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 ZG16BQ96DA0 208 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 RADILQ96JH8 1075 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 ARL5BQ96KC2 179 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 TEX37Q96LM6 180 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 ARMC7Q9H6L4 198 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 PARPBPQ9NWS1 579 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 SLC9A8Q9Y2E8 581 aa15.49■□□□□ 0.07
COL7A1-206ENST00000466591 MAGED1Q9Y5V3 778 aaPredicted RBP15.49■□□□□ 0.07
COL7A1-206ENST00000466591 ARID1AO14497 2285 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 AGAP5A6NIR3 686 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 OR5H1A6NKK0 313 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 M0R1B8 84 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 AP3D1O14617 1153 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 SOD3P08294 240 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 PAX1P15863 534 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 CDKN2CP42773 168 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 ZNF83P51522 516 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 MPP2Q14168 576 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 LIN52Q52LA3 116 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 MRPL2Q5T653 305 aaKnown RBP15.48■□□□□ 0.07
COL7A1-206ENST00000466591 AGAP6Q5VW22 663 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 OR7E24Q6IFN5 339 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 TAPBPLQ9BX59 468 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 MANSC1Q9H8J5 431 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 BARX1Q9HBU1 254 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-206ENST00000466591 TAS2R16Q9NYV7 291 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 ING1Q9UK53 422 aaPredicted RBP15.48■□□□□ 0.07
COL7A1-206ENST00000466591 RAB21Q9UL25 225 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 MGAT4BQ9UQ53 548 aa15.48■□□□□ 0.07
COL7A1-206ENST00000466591 RAI1Q7Z5J4 1906 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-206ENST00000466591 IGKV3D-15A0A087WSY6 115 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 DPRXA6NFQ7 191 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 BCAS1O75363 584 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-206ENST00000466591 BCHEP06276 602 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 CHRM4P08173 479 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 COX5AP20674 150 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 SLC1A3P43003 542 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 CRISP3P54108 245 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 TGFBR3Q03167 851 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 TNK1Q13470 666 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 LARS2Q15031 903 aaKnown RBP15.47■□□□□ 0.07
COL7A1-206ENST00000466591 C9orf135Q5VTT2 229 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 ATG4DQ86TL0 474 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-206ENST00000466591 ADGRG3Q86Y34 549 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 CCDC103Q8IW40 242 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 ZNF433Q8N7K0 673 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-206ENST00000466591 OR52P1PQ8NH57 321 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 ITCHQ96J02 903 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 ADAD1Q96M93 576 aaKnown RBP15.47■□□□□ 0.07
COL7A1-206ENST00000466591 SLC38A1Q9H2H9 487 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 ZNF232Q9UNY5 417 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 TRAPPC4Q9Y296 219 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 GPR45Q9Y5Y3 372 aa15.47■□□□□ 0.07
COL7A1-206ENST00000466591 A0A1W2PR80 420 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 TMEM72A0PK05 275 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 FAM234BA2RU67 622 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 INAFM1C9JVW0 142 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 RNF223E7ERA6 249 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 ZNF208O43345 1280 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 ZNF500O60304 480 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-206ENST00000466591 RAMP1O60894 148 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 GPIP06744 558 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 PTAFRP25105 342 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 GTF2E2P29084 291 aaKnown RBP15.46■□□□□ 0.07
COL7A1-206ENST00000466591 MAP2K6P52564 334 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 DSTNP60981 165 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 STX1BP61266 288 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 MAGOHP61326 146 aaKnown RBP15.46■□□□□ 0.07
COL7A1-206ENST00000466591 GSTA3Q16772 222 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 PDCD4Q53EL6 469 aaKnown RBP15.46■□□□□ 0.07
COL7A1-206ENST00000466591 COX20Q5RI15 118 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 OTUD3Q5T2D3 398 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-206ENST00000466591 GPAT4Q86UL3 456 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 FBXL14Q8N1E6 418 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 ZNF75CPQ92670 426 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-206ENST00000466591 TRIM2Q9C040 744 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 OSGIN1Q9UJX0 560 aa15.46■□□□□ 0.07
COL7A1-206ENST00000466591 ZNF716A6NP11 495 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 C5orf58C9J3I9 102 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 UBDO15205 165 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 BMP4P12644 408 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 CDH2P19022 906 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-206ENST00000466591 EDNRAP25101 427 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 IL12AP29459 219 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 NUDT6P53370 316 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 DMTNQ08495 405 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 OR7A5Q15622 319 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 NRF1Q16656 503 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 TMEM225Q6GV28 225 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 MIER2Q8N344 545 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 LILRB1Q8NHL6 650 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-206ENST00000466591 C1QTNF6Q9BXI9 259 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 ADPRHL2Q9NX46 363 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 THUMPD1Q9NXG2 353 aaKnown RBP15.45■□□□□ 0.06
COL7A1-206ENST00000466591 VPS13CQ709C8 3753 aa15.45■□□□□ 0.06
COL7A1-206ENST00000466591 PRAMEF27A3QJZ7 478 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 C1QCP02747 245 aa15.44■□□□□ 0.06
COL7A1-206ENST00000466591 DANCRP0C864 163 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms