RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 SPIN1Q9Y657 262 aaPredicted RBP10.42□□□□□ -0.74
CUX1-207ENST00000465461 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 DOPEY1Q5JWR5 2465 aa10.42□□□□□ -0.74
CUX1-207ENST00000465461 HCFC1P51610 2035 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 LRRK2Q5S007 2527 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 CPSF4LA6NMK7 179 aaKnown RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 CXCR6O00574 342 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 ZNF208O43345 1280 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 RAMP1O60894 148 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 PLGP00747 810 aaPredicted RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 UQCRC1P31930 480 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 RAC3P60763 192 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 NCALDP61601 193 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 CEACAM7Q14002 265 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 KRT72Q14CN4 511 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 NRF1Q16656 503 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 SLC25A35Q3KQZ1 300 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 CYBRD1Q53TN4 286 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 FAM91A1Q658Y4 838 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 OR2A2Q6IF42 318 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 RINLQ6ZS11 566 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 NUFIP2Q7Z417 695 aaKnown RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 CARM1Q86X55 608 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 CCDC103Q8IW40 242 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 TUSC5Q8IXB3 177 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 BHLHE22Q8NFJ8 381 aaPredicted RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 SLC25A43Q8WUT9 341 aaPredicted RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 CPNE4Q96A23 557 aaPredicted RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 DDIT4LQ96D03 193 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 NSL1Q96IY1 281 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 TPD52L3Q96J77 140 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 ZNF300Q96RE9 604 aaPredicted RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 CDRT15Q96T59 188 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 KCTD14Q9BQ13 255 aaPredicted RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 SFXN3Q9BWM7 321 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 C12orf49Q9H741 205 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 TMEM27Q9HBJ8 222 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 SPAG4Q9NPE6 437 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 TIGARQ9NQ88 270 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 KLHL13Q9P2N7 655 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 ABCD2Q9UBJ2 740 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 TESQ9UGI8 421 aaKnown RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 CACNA1CQ13936 2221 aa10.41□□□□□ -0.74
CUX1-207ENST00000465461 INTS1Q8N201 2190 aaKnown RBP10.41□□□□□ -0.74
CUX1-207ENST00000465461 SPTBN1Q01082 2364 aaKnown RBP10.4□□□□□ -0.74
CUX1-207ENST00000465461 ELOA3DA6NLF2 546 aaPredicted RBP10.4□□□□□ -0.74
CUX1-207ENST00000465461 B2RBV5 119 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 SYT5O00445 386 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 PRKD3O94806 890 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 IL18BPO95998 194 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 THY1P04216 161 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 C8BP07358 591 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 T-ENOLP0DO92 83 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 FCGR2AP12318 317 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 FPR1P21462 350 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 CBLP22681 906 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 RPS5P46782 204 aaKnown RBP10.4□□□□□ -0.74
CUX1-207ENST00000465461 CDH12P55289 794 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 EGR4Q05215 589 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 GUSBP1Q15486 140 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 OR7A5Q15622 319 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 ELOA3BQ3SY89 546 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 ALG10BQ5I7T1 473 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 ENTPD8Q5MY95 495 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 VTCN1Q7Z7D3 282 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 RANBP3LQ86VV4 465 aaPredicted RBP10.4□□□□□ -0.74
CUX1-207ENST00000465461 MCEMP1Q8IX19 187 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 DEFB107AQ8IZN7 70 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 PGAM4Q8N0Y7 254 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 LSMEM1Q8N8F7 131 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 ZNF610Q8N9Z0 462 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 RBM15BQ8NDT2 890 aaKnown RBP10.4□□□□□ -0.74
CUX1-207ENST00000465461 ELOA3Q8NG57 546 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 RNF128Q8TEB7 428 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 PROX1Q92786 737 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 SLC35B4Q969S0 331 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 KTI12Q96EK9 354 aaPredicted RBP10.4□□□□□ -0.74
CUX1-207ENST00000465461 ZFP3Q96NJ6 502 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 ZNF559Q9BR84 538 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 TRIM2Q9C040 744 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 JKAMPQ9P055 326 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 ING1Q9UK53 422 aaPredicted RBP10.4□□□□□ -0.74
CUX1-207ENST00000465461 AP3M1Q9Y2T2 418 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 HDGFL3Q9Y3E1 203 aa10.4□□□□□ -0.74
CUX1-207ENST00000465461 UTP20O75691 2785 aaKnown RBP10.4□□□□□ -0.74
CUX1-207ENST00000465461 USP9YO00507 2555 aaPredicted RBP10.39□□□□□ -0.75
CUX1-207ENST00000465461 IGKV1D-42A0A075B6H8 117 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 A0A0B4J2E0 115 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 A0A1B0GX12 115 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 A8MVM7 634 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 SS18L1O75177 396 aaPredicted RBP10.39□□□□□ -0.75
CUX1-207ENST00000465461 AKR7A3O95154 331 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 PMS2P2O95744 297 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 ZNF682O95780 498 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 SERPINA1P01009 418 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 CGAP01215 116 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 GGT1P19440 569 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 FUT4P22083 530 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 EDNRAP25101 427 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms