RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZG16O60844 167 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 PMS2P2O95744 297 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 ZNF682O95780 498 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 IL18BPO95998 194 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 SERPINA1P01009 418 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 OPN1LWP04000 364 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 TCN1P20061 433 aaPredicted RBP15.2■□□□□ 0.02
USP39-211ENST00000465282 SHC1P29353 583 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 PON3Q15166 354 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 ELOA3BQ3SY89 546 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 MRGPRGQ86SM5 289 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 FAM156AQ8NDB6 213 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 ELOA3Q8NG57 546 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 GEMIN6Q8WXD5 167 aaKnown RBP15.2■□□□□ 0.02
USP39-211ENST00000465282 WFDC6Q9BQY6 131 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 BTBD10Q9BSF8 475 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 PRRG4Q9BZD6 226 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 COQ10BQ9H8M1 238 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 GLRX2Q9NS18 164 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 ACTR3BQ9P1U1 418 aa15.2■□□□□ 0.02
USP39-211ENST00000465282 ASH1LQ9NR48 2969 aaKnown RBP15.19■□□□□ 0.02
USP39-211ENST00000465282 SPTBN1Q01082 2364 aaKnown RBP15.19■□□□□ 0.02
USP39-211ENST00000465282 A0A087WUJ7 227 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 A0A0G2JNJ9 132 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 TMEM72A0PK05 275 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 TRAPPC13A5PLN9 417 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 SULT2B1O00204 365 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 CXCL13O43927 109 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 THRBP10828 461 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 NCK1P16333 377 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 IFNA8P32881 189 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 DIO1P49895 249 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 MYBPHQ13203 477 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 TRIM25Q14258 630 aaKnown RBP15.19■□□□□ 0.02
USP39-211ENST00000465282 NPTX1Q15818 432 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 IFI44LQ53G44 452 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 MTX3Q5HYI7 312 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 ENTPD8Q5MY95 495 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 SLC43A2Q8N370 569 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 OR4D11Q8NGI4 311 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 LILRB4Q8NHJ6 448 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 VANGL1Q8TAA9 524 aaPredicted RBP15.19■□□□□ 0.02
USP39-211ENST00000465282 FNDC9Q8TBE3 224 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 ADAMTS16Q8TE57 1224 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 ITLN2Q8WWU7 325 aaPredicted RBP15.19■□□□□ 0.02
USP39-211ENST00000465282 SLC7A6OSQ96CW6 309 aaPredicted RBP15.19■□□□□ 0.02
USP39-211ENST00000465282 ZHX1-C8orf76Q96EF9 292 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 ZNF845Q96IR2 970 aaPredicted RBP15.19■□□□□ 0.02
USP39-211ENST00000465282 MPP4Q96JB8 637 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 NSMCE2Q96MF7 247 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 RNF122Q9H9V4 155 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 GP6Q9HCN6 339 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 Q9UFV3 132 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 PACSIN3Q9UKS6 424 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 RNF6Q9Y252 685 aa15.19■□□□□ 0.02
USP39-211ENST00000465282 COL12A1Q99715 3063 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 A0A1W2PNR3 127 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 ARPC2O15144 300 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 CHP2O43745 196 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 EIF1BO60739 113 aaKnown RBP15.18■□□□□ 0.02
USP39-211ENST00000465282 NPIPB7O75200 414 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 TOXO94900 526 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 TGM6O95932 706 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 IFNW1P05000 195 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 CCNA2P20248 432 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 CTSSP25774 331 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 OPRM1P35372 400 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 AGFG1P52594 562 aaKnown RBP15.18■□□□□ 0.02
USP39-211ENST00000465282 SLC35A1P78382 337 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 RNPS1Q15287 305 aaKnown RBP15.18■□□□□ 0.02
USP39-211ENST00000465282 ZNF239Q16600 458 aaKnown RBP15.18■□□□□ 0.02
USP39-211ENST00000465282 FKBP9P1Q75LS8 142 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 RBM45Q8IUH3 476 aaKnown RBP15.18■□□□□ 0.02
USP39-211ENST00000465282 C9orf106Q8NAJ2 232 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 CA5BP1Q8WTZ4 195 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 SDCCAG3Q96C92 435 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 ARL5BQ96KC2 179 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 TMEM43Q9BTV4 400 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 THTPAQ9BU02 230 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 PRR14Q9BWN1 585 aa15.18■□□□□ 0.02
USP39-211ENST00000465282 CPSF4LA6NMK7 179 aaKnown RBP15.17■□□□□ 0.02
USP39-211ENST00000465282 KDM4EB2RXH2 506 aaPredicted RBP15.17■□□□□ 0.02
USP39-211ENST00000465282 DVL2O14641 736 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 OR2T1O43869 369 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 OR5F1O95221 314 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 STAMBPO95630 424 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 GPIP06744 558 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 TMIGD3P0DMS9 266 aaPredicted RBP15.17■□□□□ 0.02
USP39-211ENST00000465282 ENPP1P22413 925 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 IDUAP35475 653 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 OR1E2P47887 323 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 CDH12P55289 794 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 CBX1P83916 185 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 LINC00114Q6XXX2 140 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 VTCN1Q7Z7D3 282 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 OR6S1Q8NH40 331 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 ASB9Q96DX5 294 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 HSH2DQ96JZ2 352 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 EPYCQ99645 322 aa15.17■□□□□ 0.02
USP39-211ENST00000465282 TACO1Q9BSH4 297 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms