RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MTORP42345 2549 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 ZIC3O60481 467 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 WDR1O75083 606 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 GKN3PP0CG01 181 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 DNAJA1P31689 397 aaKnown RBP15.71■□□□□ 0.11
CPSF4-209ENST00000465132 CRYBA2P53672 197 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 SESN3P58005 492 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 TAS2R41P59536 307 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 MS4A2Q01362 244 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 WIPI1Q5MNZ9 446 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-209ENST00000465132 C3orf33Q6P1S2 294 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 ARSKQ6UWY0 536 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 YRDCQ86U90 279 aaKnown RBP15.71■□□□□ 0.11
CPSF4-209ENST00000465132 SPATA24Q86W54 205 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 LIX1LQ8IVB5 337 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 MEIOBQ8N635 442 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 VANGL1Q8TAA9 524 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-209ENST00000465132 NRGNQ92686 78 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 ABTB1Q969K4 478 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-209ENST00000465132 RSRC1Q96IZ7 334 aaKnown RBP15.71■□□□□ 0.11
CPSF4-209ENST00000465132 MPP4Q96JB8 637 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 TIGARQ9NQ88 270 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 RPH3AQ9Y2J0 694 aaPredicted RBP15.71■□□□□ 0.11
CPSF4-209ENST00000465132 CHST2Q9Y4C5 530 aa15.71■□□□□ 0.11
CPSF4-209ENST00000465132 DNAJC13O75165 2243 aa15.71■□□□□ 0.1
CPSF4-209ENST00000465132 TRAPPC13A5PLN9 417 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 ELOA3DA6NLF2 546 aaPredicted RBP15.7■□□□□ 0.1
CPSF4-209ENST00000465132 M0R3H8 397 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 OIP5O43482 229 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 RRP9O43818 475 aaKnown RBP15.7■□□□□ 0.1
CPSF4-209ENST00000465132 OR5F1O95221 314 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 FABP3P05413 133 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 ZNF136P52737 540 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 RPS3AP61247 264 aaKnown RBP15.7■□□□□ 0.1
CPSF4-209ENST00000465132 RAC1P63000 192 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 ST3GAL3Q11203 375 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 OR1Q1Q15612 314 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 ELOA3BQ3SY89 546 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 GLIPR1L2Q4G1C9 344 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 C1orf185Q5T7R7 199 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 WLSQ5T9L3 541 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 DEF8Q6ZN54 512 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 CHMP1BQ7LBR1 199 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 ELOA3Q8NG57 546 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 OR6T1Q8NGN1 323 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 DDIT4LQ96D03 193 aa15.7■□□□□ 0.1
CPSF4-209ENST00000465132 DHRS12A0PJE2 317 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 OR2M5A3KFT3 312 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 HTR3EA5X5Y0 456 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 ZNF208O43345 1280 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 FREM3P0C091 2139 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 RAP2AP10114 183 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 RHCEP18577 417 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 ATP6V1B2P21281 511 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 GFRA1P56159 465 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 FOXF1Q12946 379 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 TMEM44Q2T9K0 475 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 SLC25A35Q3KQZ1 300 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 ALG10BQ5I7T1 473 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 ENTPD8Q5MY95 495 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 VASNQ6EMK4 673 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 VTCN1Q7Z7D3 282 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 RNF217Q8TC41 542 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 PRRC1Q96M27 445 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 FNDC11Q9BVV2 318 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 ADAM19Q9H013 955 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 IL1RAPQ9NPH3 570 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 SPRR3Q9UBC9 169 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 CHRNA9Q9UGM1 479 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 ENPP4Q9Y6X5 453 aa15.69■□□□□ 0.1
CPSF4-209ENST00000465132 NCKAP5O14513 1909 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 FRS3O43559 492 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 CHP2O43745 196 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 BCAS1O75363 584 aaPredicted RBP15.68■□□□□ 0.1
CPSF4-209ENST00000465132 NTN1O95631 604 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 EPPINO95925 133 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 PRG2P13727 222 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 GABRA1P14867 456 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 NQO1P15559 274 aaKnown RBP15.68■□□□□ 0.1
CPSF4-209ENST00000465132 TACR3P29371 465 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 SLC7A1P30825 629 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 OR1E2P47887 323 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 IST1P53990 364 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 GK3PQ14409 553 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 KRTAP21-3Q3LHN1 58 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 PIWIL3Q7Z3Z3 882 aaKnown RBP15.68■□□□□ 0.1
CPSF4-209ENST00000465132 ADAMTS16Q8TE57 1224 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 HS6ST2Q96MM7 605 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 SEPHS2Q99611 448 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 EPYCQ99645 322 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 SLC6A15Q9H2J7 730 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 ANKRD19PQ9H560 264 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 ALKBH4Q9NXW9 302 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 PCNX3Q9H6A9 2034 aa15.68■□□□□ 0.1
CPSF4-209ENST00000465132 TMED7-TICAM2A0A0A6YYA0 188 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 A0A0B4J2E0 115 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 A0A1B0GWA3 101 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 A0A1B0GX12 115 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 TCRBV5S2A0A599 114 aa15.67■□□□□ 0.1
CPSF4-209ENST00000465132 CPSF4LA6NMK7 179 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms