RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 NGFP01138 241 aa8.04□□□□□ -1.12
APP-213ENST00000464867 HPXP02790 462 aa8.04□□□□□ -1.12
APP-213ENST00000464867 GSNP06396 782 aa8.04□□□□□ -1.12
APP-213ENST00000464867 STMN1P16949 149 aa8.04□□□□□ -1.12
APP-213ENST00000464867 MPGP29372 298 aa8.04□□□□□ -1.12
APP-213ENST00000464867 RAD52P43351 418 aa8.04□□□□□ -1.12
APP-213ENST00000464867 DIO1P49895 249 aa8.04□□□□□ -1.12
APP-213ENST00000464867 MVKQ03426 396 aa8.04□□□□□ -1.12
APP-213ENST00000464867 MGAT5Q09328 741 aa8.04□□□□□ -1.12
APP-213ENST00000464867 TBX2Q13207 712 aaPredicted RBP8.04□□□□□ -1.12
APP-213ENST00000464867 GTF2H2Q13888 395 aa8.04□□□□□ -1.12
APP-213ENST00000464867 HEPACAMQ14CZ8 416 aa8.04□□□□□ -1.12
APP-213ENST00000464867 C3orf36Q3SXR2 165 aa8.04□□□□□ -1.12
APP-213ENST00000464867 HIKESHIQ53FT3 197 aa8.04□□□□□ -1.12
APP-213ENST00000464867 RNASEH2BQ5TBB1 312 aaKnown RBP8.04□□□□□ -1.12
APP-213ENST00000464867 CAVIN1Q6NZI2 390 aaKnown RBP8.04□□□□□ -1.12
APP-213ENST00000464867 GTF2H2CQ6P1K8 395 aa8.04□□□□□ -1.12
APP-213ENST00000464867 TRMT10BQ6PF06 316 aaKnown RBP8.04□□□□□ -1.12
APP-213ENST00000464867 R3HCC1LQ7Z5L2 792 aaKnown RBP8.04□□□□□ -1.12
APP-213ENST00000464867 ABHD12BQ7Z5M8 362 aaPredicted RBP8.04□□□□□ -1.12
APP-213ENST00000464867 MTDHQ86UE4 582 aaKnown RBP8.04□□□□□ -1.12
APP-213ENST00000464867 L3MBTL4Q8NA19 623 aa8.04□□□□□ -1.12
APP-213ENST00000464867 PIGXQ8TBF5 258 aa8.04□□□□□ -1.12
APP-213ENST00000464867 LMF2Q9BU23 707 aaKnown RBP8.04□□□□□ -1.12
APP-213ENST00000464867 SHCBP1LQ9BZQ2 653 aa8.04□□□□□ -1.12
APP-213ENST00000464867 RHOJQ9H4E5 214 aa8.04□□□□□ -1.12
APP-213ENST00000464867 ELOVL6Q9H5J4 265 aa8.04□□□□□ -1.12
APP-213ENST00000464867 SERINC1Q9NRX5 453 aa8.04□□□□□ -1.12
APP-213ENST00000464867 ADAM30Q9UKF2 790 aa8.04□□□□□ -1.12
APP-213ENST00000464867 C19orf53Q9UNZ5 99 aaPredicted RBP8.04□□□□□ -1.12
APP-213ENST00000464867 CMAHPQ9Y471 501 aa8.04□□□□□ -1.12
APP-213ENST00000464867 ARHGAP32A7KAX9 2087 aa8.04□□□□□ -1.12
APP-213ENST00000464867 TMEM129A0AVI4 362 aa8.03□□□□□ -1.12
APP-213ENST00000464867 SYCE1LA8MT33 242 aa8.03□□□□□ -1.12
APP-213ENST00000464867 H3BNH8 94 aa8.03□□□□□ -1.12
APP-213ENST00000464867 UBXN8O00124 270 aa8.03□□□□□ -1.12
APP-213ENST00000464867 PDLIM1O00151 329 aa8.03□□□□□ -1.12
APP-213ENST00000464867 ERLIN1O75477 346 aa8.03□□□□□ -1.12
APP-213ENST00000464867 KRT33AO76009 404 aa8.03□□□□□ -1.12
APP-213ENST00000464867 CSF1P09603 554 aa8.03□□□□□ -1.12
APP-213ENST00000464867 CECR9P0C854 216 aa8.03□□□□□ -1.12
APP-213ENST00000464867 CTAGE8P0CG41 777 aa8.03□□□□□ -1.12
APP-213ENST00000464867 GFAPP14136 432 aa8.03□□□□□ -1.12
APP-213ENST00000464867 SELEP16581 610 aa8.03□□□□□ -1.12
APP-213ENST00000464867 PRKCAP17252 672 aa8.03□□□□□ -1.12
APP-213ENST00000464867 TCN1P20061 433 aaPredicted RBP8.03□□□□□ -1.12
APP-213ENST00000464867 MAGEA8P43361 318 aa8.03□□□□□ -1.12
APP-213ENST00000464867 EVX1P49640 407 aa8.03□□□□□ -1.12
APP-213ENST00000464867 SUMO3P55854 103 aaPredicted RBP8.03□□□□□ -1.12
APP-213ENST00000464867 SGO1Q5FBB7 561 aa8.03□□□□□ -1.12
APP-213ENST00000464867 C3orf33Q6P1S2 294 aa8.03□□□□□ -1.12
APP-213ENST00000464867 TMEM107Q6UX40 140 aa8.03□□□□□ -1.12
APP-213ENST00000464867 WDFY1Q8IWB7 410 aa8.03□□□□□ -1.12
APP-213ENST00000464867 CTAGE4Q8IX94 777 aa8.03□□□□□ -1.12
APP-213ENST00000464867 BCL6BQ8N143 479 aaPredicted RBP8.03□□□□□ -1.12
APP-213ENST00000464867 PHOSPHO1Q8TCT1 267 aa8.03□□□□□ -1.12
APP-213ENST00000464867 PIK3R3Q92569 461 aa8.03□□□□□ -1.12
APP-213ENST00000464867 RAB8BQ92930 207 aa8.03□□□□□ -1.12
APP-213ENST00000464867 ZNF48Q96MX3 618 aaPredicted RBP8.03□□□□□ -1.12
APP-213ENST00000464867 KRTAP4-7Q9BYR0 210 aa8.03□□□□□ -1.12
APP-213ENST00000464867 CAB39LQ9H9S4 337 aa8.03□□□□□ -1.12
APP-213ENST00000464867 NMRAL1Q9HBL8 299 aa8.03□□□□□ -1.12
APP-213ENST00000464867 TMEM45AQ9NWC5 275 aa8.03□□□□□ -1.12
APP-213ENST00000464867 TXNDC16Q9P2K2 825 aa8.03□□□□□ -1.12
APP-213ENST00000464867 REXO2Q9Y3B8 237 aaKnown RBP8.03□□□□□ -1.12
APP-213ENST00000464867 BIRC6Q9NR09 4857 aa8.02□□□□□ -1.12
APP-213ENST00000464867 GNG14A0A1W2PPG7 69 aa8.02□□□□□ -1.13
APP-213ENST00000464867 A0A1W2PQD3 144 aa8.02□□□□□ -1.13
APP-213ENST00000464867 GXYLT2A0PJZ3 443 aa8.02□□□□□ -1.13
APP-213ENST00000464867 ZNF716A6NP11 495 aa8.02□□□□□ -1.13
APP-213ENST00000464867 CCDC188H7C350 402 aa8.02□□□□□ -1.13
APP-213ENST00000464867 GTPBP1O00178 669 aaKnown RBP8.02□□□□□ -1.13
APP-213ENST00000464867 UPK1AO00322 258 aa8.02□□□□□ -1.13
APP-213ENST00000464867 PIP5K1CO60331 668 aa8.02□□□□□ -1.13
APP-213ENST00000464867 BANF1O75531 89 aa8.02□□□□□ -1.13
APP-213ENST00000464867 NDUFA7O95182 113 aa8.02□□□□□ -1.13
APP-213ENST00000464867 GPANK1O95872 356 aa8.02□□□□□ -1.13
APP-213ENST00000464867 IGKV1D-16P01601 117 aa8.02□□□□□ -1.13
APP-213ENST00000464867 JUNP05412 331 aaKnown RBP8.02□□□□□ -1.13
APP-213ENST00000464867 IL3P08700 152 aa8.02□□□□□ -1.13
APP-213ENST00000464867 CALCRP30988 508 aa8.02□□□□□ -1.13
APP-213ENST00000464867 LCN1P31025 176 aa8.02□□□□□ -1.13
APP-213ENST00000464867 P2RX1P51575 399 aa8.02□□□□□ -1.13
APP-213ENST00000464867 CCNG1P51959 295 aa8.02□□□□□ -1.13
APP-213ENST00000464867 NCBP2P52298 156 aaKnown RBP eCLIP8.02□□□□□ -1.13
APP-213ENST00000464867 HGFACQ04756 655 aa8.02□□□□□ -1.13
APP-213ENST00000464867 TRADDQ15628 312 aa8.02□□□□□ -1.13
APP-213ENST00000464867 PFKFB4Q16877 469 aa8.02□□□□□ -1.13
APP-213ENST00000464867 MMEL1Q495T6 779 aa8.02□□□□□ -1.13
APP-213ENST00000464867 AVPI1Q5T686 147 aa8.02□□□□□ -1.13
APP-213ENST00000464867 ABLIM2Q6H8Q1 611 aa8.02□□□□□ -1.13
APP-213ENST00000464867 TMPPEQ6ZT21 453 aa8.02□□□□□ -1.13
APP-213ENST00000464867 GOLGA7Q7Z5G4 137 aa8.02□□□□□ -1.13
APP-213ENST00000464867 MTERF4Q7Z6M4 381 aaKnown RBP8.02□□□□□ -1.13
APP-213ENST00000464867 IGDCC3Q8IVU1 814 aa8.02□□□□□ -1.13
APP-213ENST00000464867 PDIK1LQ8N165 341 aa8.02□□□□□ -1.13
APP-213ENST00000464867 ZNF527Q8NB42 609 aa8.02□□□□□ -1.13
APP-213ENST00000464867 SLC16A11Q8NCK7 471 aa8.02□□□□□ -1.13
APP-213ENST00000464867 BHLHE22Q8NFJ8 381 aaPredicted RBP8.02□□□□□ -1.13
APP-213ENST00000464867 OR6Y1Q8NGX8 325 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms