RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ZNF566Q969W8 418 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 TMEM106AQ96A25 262 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 RASD2Q96D21 266 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 CNRIP1Q96F85 164 aaPredicted RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 FAM71F1Q96KD3 344 aaPredicted RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 Q96M85 177 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SEC22CQ9BRL7 303 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 CDCA4Q9BXL8 241 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 ZNF700Q9H0M5 742 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 NOX4Q9NPH5 578 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SERINC1Q9NRX5 453 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 PLCXD1Q9NUJ7 323 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SAGE1Q9NXZ1 904 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 TBC1D29Q9UFV1 150 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SERTAD3Q9UJW9 196 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 FBXL2Q9UKC9 423 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 ZNF318Q5VUA4 2279 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 M0R036 132 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 PEX14O75381 377 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 AK1P00568 194 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 RLN2P04090 185 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 CSF3P09919 207 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 F3P13726 295 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 TGM1P22735 817 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 RPS5P46782 204 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 AIMP2Q13155 320 aaKnown RBP8.43□□□□□ -1.06
HPS4-208ENST00000464362 GBX1Q14549 363 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 RAB11BQ15907 218 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SAXO2Q658L1 398 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 MFSD12Q6NUT3 480 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 MBOAT2Q6ZWT7 520 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 RASGRP3Q8IV61 690 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SIMC1Q8NDZ2 872 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 OR13C3Q8NGS6 347 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 OR2L8Q8NGY9 312 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 DUSP19Q8WTR2 217 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 C15orf40Q8WUR7 153 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 ALG14Q96F25 216 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SEC22AQ96IW7 307 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 TSSK2Q96PF2 358 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 MFFQ9GZY8 342 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 SLAMF7Q9NQ25 335 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 PLCL2Q9UPR0 1127 aa8.43□□□□□ -1.06
HPS4-208ENST00000464362 B4DXG7 233 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 TRAPPC6AO75865 159 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 TCRBP04435 133 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 HOXB3P14651 431 aaPredicted RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 SLC2A5P22732 501 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 IFITM3Q01628 133 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 GPR18Q14330 331 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 SPIN3Q5JUX0 258 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 METRNLQ641Q3 311 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 C8orf82Q6P1X6 216 aaPredicted RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 FAM198BQ6UWH4 519 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 TMEM184AQ6ZMB5 413 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 MCATQ8IVS2 390 aaKnown RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 AVL9Q8NBF6 648 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 DNAAF1Q8NEP3 725 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 DVL3Q92997 716 aaPredicted RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 HAVCR1Q96D42 359 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 MS4A6EQ96DS6 147 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 SLC35A4Q96G79 324 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 PITX2Q99697 317 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 NUDT22Q9BRQ3 303 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 GABARAPL1Q9H0R8 117 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 ISG20L2Q9H9L3 353 aaKnown RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 COPZ2Q9P299 210 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 COPS3Q9UNS2 423 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 AP1M2Q9Y6Q5 423 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 SDK2Q58EX2 2172 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 DCNP07585 359 aaKnown RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 SYPP08247 313 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 PCMT1P22061 227 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 UBE2MP61081 183 aaKnown RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 SNRPGP62308 76 aaKnown RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 RAE1P78406 368 aaKnown RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 BTN1A1Q13410 526 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 SGCBQ16585 318 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 HBMQ6B0K9 141 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 Q6ZNB5 142 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 KIF18BQ86Y91 864 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 CCDC71Q8IV32 467 aaPredicted RBP8.42□□□□□ -1.06
HPS4-208ENST00000464362 OR7G2Q8NG99 324 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 SPPL3Q8TCT6 385 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 GPR148Q8TDV2 347 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 TANKQ92844 425 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 NUBP2Q9Y5Y2 271 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 NCOR1O75376 2440 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 LTBP1Q14766 1721 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 APBB3O95704 486 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 MPIG6BO95866 241 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 HBQ1P09105 142 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 BSGP35613 385 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 ARHGDIBP52566 201 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 SIRPAP78324 504 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 EFR3AQ14156 821 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 GPR176Q14439 515 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 FAM69BQ5VUD6 431 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 TMEM215Q68D42 235 aa8.42□□□□□ -1.06
HPS4-208ENST00000464362 LCN10Q6JVE6 187 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms