RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 TMEM204Q9BSN7 226 aa17.05■□□□□ 0.32
CCHCR1-210ENST00000464012 CACYBPQ9HB71 228 aaKnown RBP17.05■□□□□ 0.32
CCHCR1-210ENST00000464012 NGBQ9NPG2 151 aa17.05■□□□□ 0.32
CCHCR1-210ENST00000464012 RNF115Q9Y4L5 304 aa17.05■□□□□ 0.32
CCHCR1-210ENST00000464012 PCDHB14Q9Y5E9 798 aa17.05■□□□□ 0.32
CCHCR1-210ENST00000464012 ACANP16112 2415 aa17.05■□□□□ 0.32
CCHCR1-210ENST00000464012 IGKV3D-15A0A087WSY6 115 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 CDHR4A6H8M9 788 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 CLIC1O00299 241 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 FAAHO00519 579 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 DNPH1O43598 174 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 CD3EP07766 207 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 NUDT7P0C024 238 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 IMPDH2P12268 514 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 FKBP2P26885 142 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 ADSLP30566 484 aaPredicted RBP17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 PTH2RP49190 550 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 CLK1P49759 484 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 IDH3AP50213 366 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 NCMAPQ5T1S8 102 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 YTHDF3Q7Z739 585 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 TMEM171Q8WVE6 324 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 APH1AQ96BI3 265 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 C18orf12Q96KH6 178 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 Q96MF0 132 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 ESRP2Q9H6T0 727 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 CCDC167Q9P0B6 97 aa17.04■□□□□ 0.32
CCHCR1-210ENST00000464012 ROS1P08922 2347 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 GPR171O14626 319 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 ZNF208O43345 1280 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 RAD51DO75771 328 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 TGDSO95455 350 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 FOSL1P15407 271 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 COX5AP20674 150 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 CXCR1P25024 350 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 AQP5P55064 265 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 SLC35A1P78382 337 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 LARS2Q15031 903 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 PDK3Q15120 406 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 PPA1Q15181 289 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 RGNQ15493 299 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 RNF220Q5VTB9 566 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 CASP12Q6UXS9 341 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 Q71RC1 249 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 CLIP4Q8N3C7 705 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 GOLGA6L1Q8N7Z2 621 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 NEUROG1Q92886 237 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 MAL2Q969L2 176 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 NAA11Q9BSU3 229 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 THUMPD1Q9NXG2 353 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 TRAPPC4Q9Y296 219 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 VPS13CQ709C8 3753 aa17.03■□□□□ 0.32
CCHCR1-210ENST00000464012 A0A096LPI6 279 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 A0A0G2JPF8 293 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 CIB4A0PJX0 185 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 CCT8L1PA6NM43 557 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 HNRNPCL2B2RXH8 293 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 HNRNPCL3B7ZW38 293 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 HNRNPCL1O60812 293 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 MRPL33O75394 65 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 INHBBP09529 407 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 HNRNPCL4P0DMR1 293 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 PRG2P13727 222 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 GGT1P19440 569 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 NCF2P19878 526 aaPredicted RBP17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 NTF4P34130 210 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 IDUAP35475 653 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 ACAA2P42765 397 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 COPZ1P61923 177 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 BSPH1Q075Z2 132 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 BNIP2Q12982 314 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 CEACAM7Q14002 265 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 ZNF311Q5JNZ3 666 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 FBXW9Q5XUX1 488 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 WBP2NLQ6ICG8 309 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 ADAM5Q6NVV9 412 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 SEZ6L2Q6UXD5 910 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 FUNDC1Q8IVP5 155 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 ZNF433Q8N7K0 673 aaPredicted RBP17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 ZNF611Q8N823 705 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 KBTBD8Q8NFY9 601 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 MUCL1Q96DR8 90 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 SPDL1Q96EA4 605 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 THOC1Q96FV9 657 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 USB1Q9BQ65 265 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 ADAM19Q9H013 955 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 RAD21L1Q9H4I0 556 aa17.02■□□□□ 0.32
CCHCR1-210ENST00000464012 C5orf58C9J3I9 102 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 FRS3O43559 492 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 EIF1BO60739 113 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 THBS1P07996 1170 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 HOXB9P17482 250 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 SLC16A1P53985 500 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 FAPQ12884 760 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 OR7A5Q15622 319 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 OTUD3Q5T2D3 398 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 SERPINA11Q86U17 422 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 BIVMQ86UB2 503 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 OR52N5Q8NH56 324 aa17.01■□□□□ 0.31
CCHCR1-210ENST00000464012 LILRB1Q8NHL6 650 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms