RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 IMPDH2P12268 514 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 KLK2P20151 261 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 EGR4Q05215 589 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 MYBPHQ13203 477 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 PDSS1Q5T2R2 415 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 LINC00114Q6XXX2 140 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 TSEN54Q7Z6J9 526 aaKnown RBP16.96■□□□□ 0.31
LMNB1-204ENST00000463908 LIX1LQ8IVB5 337 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 FAM86B1Q8N7N1 296 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 DNAJA4Q8WW22 397 aaPredicted RBP16.96■□□□□ 0.31
LMNB1-204ENST00000463908 ROBO4Q8WZ75 1007 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 THTPAQ9BU02 230 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 AMBRA1Q9C0C7 1298 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 C12orf10Q9HB07 376 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 RPS6KB2Q9UBS0 482 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 SLC9A8Q9Y2E8 581 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 ZNF175Q9Y473 711 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 SNX13Q9Y5W8 968 aa16.96■□□□□ 0.31
LMNB1-204ENST00000463908 SPIN1Q9Y657 262 aaPredicted RBP16.96■□□□□ 0.31
LMNB1-204ENST00000463908 SPTBN1Q01082 2364 aaKnown RBP16.95■□□□□ 0.3
LMNB1-204ENST00000463908 A0A087WUJ7 227 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 CPSF4LA6NMK7 179 aaKnown RBP16.95■□□□□ 0.3
LMNB1-204ENST00000463908 GYG2O15488 501 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 FUT4P22083 530 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 ENPP1P22413 925 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 SLC7A1P30825 629 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 DIO1P49895 249 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 RAC3P60763 192 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 FOXF2Q12947 444 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 ALG10BQ5I7T1 473 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 PGM2L1Q6PCE3 622 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 ZNF613Q6PF04 617 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 ADAMTS16Q8TE57 1224 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 LZICQ8WZA0 190 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 SLC47A1Q96FL8 570 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 HSH2DQ96JZ2 352 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 TM9SF2Q99805 663 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 POTEKPQ9BYX7 375 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 PAQR5Q9NXK6 330 aaPredicted RBP16.95■□□□□ 0.3
LMNB1-204ENST00000463908 MAGEL2Q9UJ55 1249 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 RPS6KA6Q9UK32 745 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 TRAPPC4Q9Y296 219 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 HDGFL3Q9Y3E1 203 aa16.95■□□□□ 0.3
LMNB1-204ENST00000463908 USP9XQ93008 2570 aaPredicted RBP16.94■□□□□ 0.3
LMNB1-204ENST00000463908 PHF3Q92576 2039 aaKnown RBP16.94■□□□□ 0.3
LMNB1-204ENST00000463908 IGKV1D-42A0A075B6H8 117 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 A8MVM7 634 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 SULT2B1O00204 365 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 GSC2O15499 205 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 PRKD3O94806 890 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 IL2RAP01589 272 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 PNMTP11086 282 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 SMSP52788 366 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 NCALDP61601 193 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 PIN1Q13526 163 aaPredicted RBP16.94■□□□□ 0.3
LMNB1-204ENST00000463908 TRIM25Q14258 630 aaKnown RBP16.94■□□□□ 0.3
LMNB1-204ENST00000463908 SDCCAG3Q96C92 435 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 DDIT4LQ96D03 193 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 RNF122Q9H9V4 155 aa16.94■□□□□ 0.3
LMNB1-204ENST00000463908 IGHV3-15A0A0B4J1V0 119 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 TRAPPC13A5PLN9 417 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 ELOA3DA6NLF2 546 aaPredicted RBP16.93■□□□□ 0.3
LMNB1-204ENST00000463908 HSPB2A8KAH6 182 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 GMNNO75496 209 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 PMS2P2O95744 297 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 AGAP20933 346 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 AGFG1P52594 562 aaKnown RBP16.93■□□□□ 0.3
LMNB1-204ENST00000463908 HSPB2Q16082 182 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 ZNF239Q16600 458 aaKnown RBP16.93■□□□□ 0.3
LMNB1-204ENST00000463908 ELOA3BQ3SY89 546 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 DNAL1Q4LDG9 190 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 IFI44LQ53G44 452 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 XKRXQ6PP77 449 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 WDR88Q6ZMY6 472 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 DEF8Q6ZN54 512 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 FKBP9P1Q75LS8 142 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 P4HA3Q7Z4N8 544 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 GDF7Q7Z4P5 450 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 P3H2Q8IVL5 708 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 ZNF808Q8N4W9 903 aaPredicted RBP16.93■□□□□ 0.3
LMNB1-204ENST00000463908 ELOA3Q8NG57 546 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 LILRB4Q8NHJ6 448 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 STK35Q8TDR2 534 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 CPNE4Q96A23 557 aaPredicted RBP16.93■□□□□ 0.3
LMNB1-204ENST00000463908 INTS12Q96CB8 462 aaKnown RBP16.93■□□□□ 0.3
LMNB1-204ENST00000463908 NSMCE2Q96MF7 247 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 PRSS27Q9BQR3 290 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 CADM1Q9BY67 442 aaKnown RBP16.93■□□□□ 0.3
LMNB1-204ENST00000463908 TIGARQ9NQ88 270 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 ACTR3BQ9P1U1 418 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 RIMS3Q9UJD0 308 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 A4GNTQ9UNA3 340 aa16.93■□□□□ 0.3
LMNB1-204ENST00000463908 NCOA6Q14686 2063 aaPredicted RBP16.93■□□□□ 0.3
LMNB1-204ENST00000463908 ZNF814B7Z6K7 855 aa16.92■□□□□ 0.3
LMNB1-204ENST00000463908 ACOT8O14734 319 aa16.92■□□□□ 0.3
LMNB1-204ENST00000463908 SMAD9O15198 467 aaKnown RBP16.92■□□□□ 0.3
LMNB1-204ENST00000463908 DNAJC8O75937 253 aaPredicted RBP16.92■□□□□ 0.3
LMNB1-204ENST00000463908 ATP5HO75947 161 aa16.92■□□□□ 0.3
LMNB1-204ENST00000463908 SYNGR4O95473 234 aa16.92■□□□□ 0.3
LMNB1-204ENST00000463908 ATP6V1B2P21281 511 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms