RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 CNOT9Q92600 299 aaKnown RBP13.43□□□□□ -0.26
CMSS1-202ENST00000463526 FBXO17Q96EF6 278 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 DPY30Q9C005 99 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 SHARPINQ9H0F6 387 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 FKRPQ9H9S5 495 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 SLC7A10Q9NS82 523 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.43□□□□□ -0.26
CMSS1-202ENST00000463526 NOP53Q9NZM5 478 aaKnown RBP13.43□□□□□ -0.26
CMSS1-202ENST00000463526 TMEM181Q9P2C4 612 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 MALT1Q9UDY8 824 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 TMED7Q9Y3B3 224 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 PMF1-BGLAPU3KQ54 211 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 TMEM72A0PK05 275 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 WDR91A4D1P6 747 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 ATP6V1G2-DDX39BF2Z307 99 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 H7C417 338 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 AP3D1O14617 1153 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 AGR2O95994 175 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 C1QCP02747 245 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 BPGMP07738 259 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 IGHV4-31P0DP07 118 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 USF1P22415 310 aaPredicted RBP13.42□□□□□ -0.26
CMSS1-202ENST00000463526 UQCRC2P22695 453 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 CHI3L1P36222 383 aaPredicted RBP13.42□□□□□ -0.26
CMSS1-202ENST00000463526 SERPINB5P36952 375 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 EFNA4P52798 201 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 SLC16A1P53985 500 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 SLC25A3Q00325 362 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 CHRNB3Q05901 458 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 CARTPTQ16568 116 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 TSPO2Q5TGU0 170 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 IL17RELQ6ZVW7 336 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 EIF1ADQ8N9N8 165 aaKnown RBP13.42□□□□□ -0.26
CMSS1-202ENST00000463526 MIPOL1Q8TD10 442 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 NAA11Q9BSU3 229 aaPredicted RBP13.42□□□□□ -0.26
CMSS1-202ENST00000463526 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 CHODLQ9H9P2 273 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 SLC17A5Q9NRA2 495 aa13.42□□□□□ -0.26
CMSS1-202ENST00000463526 PRAMEF27A3QJZ7 478 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 KLF11O14901 512 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 ITM2AO43736 263 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 LMX1BO60663 402 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 IMPDH2P12268 514 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 BMP4P12644 408 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 APOBEC3AP31941 199 aaPredicted RBP13.41□□□□□ -0.26
CMSS1-202ENST00000463526 CLK1P49759 484 aaKnown RBP13.41□□□□□ -0.26
CMSS1-202ENST00000463526 KHKP50053 298 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 PHC1P78364 1004 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 SLC35A1P78382 337 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 LSM11P83369 360 aaKnown RBP eCLIP13.41□□□□□ -0.26
CMSS1-202ENST00000463526 HPCAP84074 193 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 PLAURQ03405 335 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 IFFO1Q0D2I5 559 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 GGTLC2Q14390 218 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 KRTAP24-1Q3LI83 254 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 NUDCD3Q8IVD9 361 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 PROX1Q92786 737 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 C3orf49Q96BT1 292 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 PKNOX2Q96KN3 472 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 SAP130Q9H0E3 1048 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 POLE3Q9NRF9 147 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 PARPBPQ9NWS1 579 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
CMSS1-202ENST00000463526 OSGIN1Q9UJX0 560 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 MOKQ9UQ07 419 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 TRAPPC4Q9Y296 219 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 SLC9A8Q9Y2E8 581 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 AMDHD2Q9Y303 409 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 FLVCR1Q9Y5Y0 555 aa13.41□□□□□ -0.26
CMSS1-202ENST00000463526 HEATR1Q9H583 2144 aaKnown RBP13.4□□□□□ -0.26
CMSS1-202ENST00000463526 PRSS51A0A1B0GVH4 220 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 ZC3H12DA2A288 527 aaKnown RBP13.4□□□□□ -0.26
CMSS1-202ENST00000463526 PDLIM1O00151 329 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 DNPH1O43598 174 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 SCN2BO60939 215 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
CMSS1-202ENST00000463526 TACR3P29371 465 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 POLR2HP52434 150 aaKnown RBP13.4□□□□□ -0.26
CMSS1-202ENST00000463526 PRPS1P60891 318 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 H3F3AP84243 136 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 SYPL1Q16563 259 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 ANXA8L1Q5VT79 327 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 SAXO2Q658L1 398 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 KLHL24Q6TFL4 600 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 RIBC1Q8N443 379 aaPredicted RBP13.4□□□□□ -0.26
CMSS1-202ENST00000463526 ZNF781Q8N8C0 355 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 ANKFN1Q8N957 763 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 VPS37AQ8NEZ2 397 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 OR8J2Q8NGG1 315 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 DDIT4LQ96D03 193 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 ASIC5Q9NY37 505 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 LPAR3Q9UBY5 353 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 DCTN4Q9UJW0 460 aa13.4□□□□□ -0.26
CMSS1-202ENST00000463526 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.4□□□□□ -0.26
CMSS1-202ENST00000463526 EIF1BO60739 113 aaKnown RBP13.39□□□□□ -0.27
CMSS1-202ENST00000463526 F12P00748 615 aaPredicted RBP13.39□□□□□ -0.27
CMSS1-202ENST00000463526 CSF3P09919 207 aa13.39□□□□□ -0.27
CMSS1-202ENST00000463526 HTR3AP46098 478 aa13.39□□□□□ -0.27
CMSS1-202ENST00000463526 PDLIM4P50479 330 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms