RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TUBAL3A6NHL2 446 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 NDUFAB1O14561 156 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 FMO6PO60774 539 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 MFN2O95140 757 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 YES1P07947 543 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 GKN3PP0CG01 181 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 PRDX6P30041 224 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 VEZF1Q14119 521 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 CAPRIN1Q14444 709 aaKnown RBP11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 VMACQ2NL98 169 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 HACD2Q6Y1H2 254 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 CPLX4Q7Z7G2 160 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 LUZP2Q86TE4 346 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 STK35Q8TDR2 534 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 DNAJA4Q8WW22 397 aaPredicted RBP11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 ROBO4Q8WZ75 1007 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 DACH2Q96NX9 599 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 ELAC2Q9BQ52 826 aaKnown RBP11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 NAA11Q9BSU3 229 aaPredicted RBP11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 RPS6KB2Q9UBS0 482 aa11.66□□□□□ -0.54
R3HDM1-213ENST00000463230 IGKV3D-15A0A087WSY6 115 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 A8MVM7 634 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 SMAD9O15198 467 aaKnown RBP11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 SNX3O60493 162 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 FESP07332 822 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 COX4I1P13073 169 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 PRF1P14222 555 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 PPP3CBP16298 524 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 TLE4Q04727 773 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 FAM91A1Q658Y4 838 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 CADM2Q8N3J6 435 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 OR10A6Q8NH74 314 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 ECSITQ9BQ95 431 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 MYLK2Q9H1R3 596 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 NDRG3Q9UGV2 375 aa11.65□□□□□ -0.54
R3HDM1-213ENST00000463230 ANKHD1Q8IWZ3 2542 aaKnown RBP11.65□□□□□ -0.55
R3HDM1-213ENST00000463230 FAM220BPB1ANY3 271 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 TMEM229AB2RXF0 380 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 GPR171O14626 319 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 PNMTP11086 282 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 EPXP11678 715 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 POU2F1P14859 743 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 IDUAP35475 653 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 SLC16A1P53985 500 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 NCALDP61601 193 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 RASGEF1BQ0VAM2 473 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 SWT1Q5T5J6 900 aaKnown RBP11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 ZNF474Q6S9Z5 364 aaPredicted RBP11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 ATG4DQ86TL0 474 aaPredicted RBP11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 RANBP3LQ86VV4 465 aaPredicted RBP11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 ZNF610Q8N9Z0 462 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 ABHD3Q8WU67 409 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 C3orf49Q96BT1 292 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 CMTM5Q96DZ9 223 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 HOPXQ9BPY8 73 aaPredicted RBP11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 USB1Q9BQ65 265 aaKnown RBP11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 PSD2Q9BQI7 771 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 OPN3Q9H1Y3 402 aaPredicted RBP11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 CRIM1Q9NZV1 1036 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 CACNA1DQ01668 2161 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 LOC100653049A0A140TA62 436 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 FZD7O75084 574 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 KRT34O76011 436 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 CNOT4O95628 575 aaKnown RBP11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 IFNA14P01570 189 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 GPIP06744 558 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 PRG2P13727 222 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 CPOXP36551 454 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 SEC24CP53992 1094 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 GNGT1P63211 74 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 H3F3AP84243 136 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 ARHGDIGQ99819 225 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 EFCAB1Q9HAE3 211 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 ARMCX1Q9P291 453 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 TESMINQ9Y4I5 508 aa11.64□□□□□ -0.55
R3HDM1-213ENST00000463230 FAM221AA4D161 298 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 C16orf97H3BN30 126 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 NPIPB7O75200 414 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 LGI1O95970 557 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 KCNJ5P48544 419 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 RGS8P57771 180 aaPredicted RBP11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 OR2B6P58173 313 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 SF3A3Q12874 501 aaKnown RBP eCLIP11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 NRF1Q16656 503 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 PAQR6Q6TCH4 344 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 OR52E4Q8NGH9 312 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 OR6S1Q8NH40 331 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 RCN3Q96D15 328 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 ARL5BQ96KC2 179 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 LURAP1Q96LR2 239 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 GPATCH1Q9BRR8 931 aaKnown RBP11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 HDHD5Q9BXW7 423 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 OR11A1Q9GZK7 315 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 TMEM27Q9HBJ8 222 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 SELENONQ9NZV5 590 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 CLEC4AQ9UMR7 237 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 LIPT2A6NK58 231 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 M0QX08 132 aa11.63□□□□□ -0.55
R3HDM1-213ENST00000463230 AQP1P29972 269 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms