RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 PIGXQ8TBF5 258 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 AGR3Q8TD06 166 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 TMEM234Q8WY98 164 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 SLC35G5Q96KT7 338 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 SORCS2Q96PQ0 1159 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 C19orf24Q9BVV8 132 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 C1QTNF6Q9BXI9 259 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 BEX2Q9BXY8 128 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 ROPN1BQ9BZX4 212 aaPredicted RBP9.76□□□□□ -0.85
PTPN7-204ENST00000462815 OR51I1Q9H343 314 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 VIPAS39Q9H9C1 493 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 PPCSQ9HAB8 311 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 ROPN1Q9HAT0 212 aaPredicted RBP9.76□□□□□ -0.85
PTPN7-204ENST00000462815 EXOSC3Q9NQT5 275 aaKnown RBP9.76□□□□□ -0.85
PTPN7-204ENST00000462815 SERINC1Q9NRX5 453 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 SLC7A10Q9NS82 523 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 MID2Q9UJV3 735 aa9.76□□□□□ -0.85
PTPN7-204ENST00000462815 ARFGEF3Q5TH69 2177 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 RNF103-CHMP3A0A140T963 221 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 CIB4A0PJX0 185 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 SMIM23A6NLE4 172 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 DUXAA6NLW8 204 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 CCT8L1PA6NM43 557 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 ATP6V1G2-DDX39BF2Z307 99 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 HAX1O00165 279 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 RNASET2O00584 256 aaKnown RBP9.75□□□□□ -0.85
PTPN7-204ENST00000462815 AP3D1O14617 1153 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 GPR171O14626 319 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 MRPL33O75394 65 aaKnown RBP9.75□□□□□ -0.85
PTPN7-204ENST00000462815 SKAP2O75563 359 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-204ENST00000462815 CYP7B1O75881 506 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 CSF3P09919 207 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 SOAT1P35610 550 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 CLK1P49759 484 aaKnown RBP9.75□□□□□ -0.85
PTPN7-204ENST00000462815 TSPO2Q5TGU0 170 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 SAXO2Q658L1 398 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 OR4F3Q6IEY1 312 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 BHLHB9Q6PI77 547 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 IL17RELQ6ZVW7 336 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 GRINAQ7Z429 371 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 HMGN2P46Q86SG4 172 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 HOMEZQ8IX15 550 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 UBE2J2Q8N2K1 259 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 FNDC5Q8NAU1 212 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 OR8J2Q8NGG1 315 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 MSI2Q96DH6 328 aaKnown RBP9.75□□□□□ -0.85
PTPN7-204ENST00000462815 SOX7Q9BT81 388 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 POU2F3Q9UKI9 436 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 TRAPPC4Q9Y296 219 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 SLC35A3Q9Y2D2 325 aa9.75□□□□□ -0.85
PTPN7-204ENST00000462815 IGHV4-61A0A0C4DH41 118 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 TMEM72A0PK05 275 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 ZC3H12DA2A288 527 aaKnown RBP9.74□□□□□ -0.85
PTPN7-204ENST00000462815 ANKRD28O15084 1053 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 ATP8B1O43520 1251 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 LMX1BO60663 402 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 OR12D1P0DN82 309 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 APOBEC3AP31941 199 aaPredicted RBP9.74□□□□□ -0.85
PTPN7-204ENST00000462815 NR4A2P43354 598 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 P2RY4P51582 365 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 LSM11P83369 360 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTPN7-204ENST00000462815 EMX2Q04743 252 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 FAM120AOSQ5T036 256 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 C9orf135Q5VTT2 229 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 CASP12Q6UXS9 341 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 CNOT9Q92600 299 aaKnown RBP9.74□□□□□ -0.85
PTPN7-204ENST00000462815 RAB8BQ92930 207 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 TMEM45BQ96B21 275 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 ARL8AQ96BM9 186 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 ROPN1LQ96C74 230 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 PRPF18Q99633 342 aaKnown RBP9.74□□□□□ -0.85
PTPN7-204ENST00000462815 SHARPINQ9H0F6 387 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 POLE3Q9NRF9 147 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 TMEM181Q9P2C4 612 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 OSGIN1Q9UJX0 560 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 AMDHD2Q9Y303 409 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 WDR45Q9Y484 360 aa9.74□□□□□ -0.85
PTPN7-204ENST00000462815 SPIN1Q9Y657 262 aaPredicted RBP9.74□□□□□ -0.85
PTPN7-204ENST00000462815 TMED7-TICAM2A0A0A6YYA0 188 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 IGHV1-18A0A0C4DH31 117 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 NDUFS8O00217 210 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 HMGN4O00479 90 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 FAAHO00519 579 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 CFLARO15519 480 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 ZNF208O43345 1280 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 TFPIP10646 304 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 CREB1P16220 341 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 RPS4Y1P22090 263 aaKnown RBP9.73□□□□□ -0.85
PTPN7-204ENST00000462815 FKBP2P26885 142 aaKnown RBP9.73□□□□□ -0.85
PTPN7-204ENST00000462815 RYKP34925 604 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 SERPINB5P36952 375 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 ETV4P43268 484 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 MAGEA8P43361 318 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 GZMKP49863 264 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 KCNJ10P78508 379 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 MAPK11Q15759 364 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 ZSWIM7Q19AV6 140 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 SMU1Q2TAY7 513 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 TNFAIP8L3Q5GJ75 292 aa9.73□□□□□ -0.85
PTPN7-204ENST00000462815 CEP85LQ5SZL2 805 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms