RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 RLIMQ9NVW2 624 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 SLC25A37Q9NYZ2 338 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 TMEM181Q9P2C4 612 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 MTORP42345 2549 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 DSCAMO60469 2012 aa9.02□□□□□ -0.97
SF3A3-204ENST00000462258 C2CD3Q4AC94 2353 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 A0A0G2JPF8 293 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 ZC3H12DA2A288 527 aaKnown RBP9.01□□□□□ -0.97
SF3A3-204ENST00000462258 HNRNPCL2B2RXH8 293 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 HNRNPCL3B7ZW38 293 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 C5orf58C9J3I9 102 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 KLF4O43474 513 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 HNRNPCL1O60812 293 aaKnown RBP9.01□□□□□ -0.97
SF3A3-204ENST00000462258 LYZL6O75951 148 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 SASH3O75995 380 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 HNRNPCL4P0DMR1 293 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 CD99P14209 185 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 COX5AP20674 150 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 PPIBP23284 216 aaKnown RBP9.01□□□□□ -0.97
SF3A3-204ENST00000462258 SLC16A1P53985 500 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 OR2B6P58173 313 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 COPZ1P61923 177 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 FOXD4Q12950 439 aaPredicted RBP9.01□□□□□ -0.97
SF3A3-204ENST00000462258 ITGADQ13349 1161 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 PDK3Q15120 406 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 TAB1Q15750 504 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 ACKR1Q16570 336 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 ZSWIM7Q19AV6 140 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 AGKQ53H12 422 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 PAGE3Q5JUK9 113 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 GCNT6Q5T4J0 391 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 PRR14LQ5THK1 2151 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 PRAMEF8Q5VWM4 474 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 PRAMEF7Q5VXH5 474 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 WBP2NLQ6ICG8 309 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 ALKBH2Q6NS38 261 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF704Q6ZNC4 412 aaPredicted RBP9.01□□□□□ -0.97
SF3A3-204ENST00000462258 BHLHA15Q7RTS1 189 aaPredicted RBP9.01□□□□□ -0.97
SF3A3-204ENST00000462258 SERPINA11Q86U17 422 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF100Q8IYN0 542 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 CADM2Q8N3J6 435 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 THOC1Q96FV9 657 aaKnown RBP9.01□□□□□ -0.97
SF3A3-204ENST00000462258 SPATA9Q9BWV2 254 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 HDHD5Q9BXW7 423 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 ARMC7Q9H6L4 198 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 BCL2L10Q9HD36 194 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 TMEM45AQ9NWC5 275 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 SLAMF8Q9P0V8 285 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 NOSIPQ9Y314 301 aaKnown RBP9.01□□□□□ -0.97
SF3A3-204ENST00000462258 IFT52Q9Y366 437 aa9.01□□□□□ -0.97
SF3A3-204ENST00000462258 TRBV5-3A0A0A0MS03 114 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 GPR171O14626 319 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 FRS3O43559 492 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 EIF1BO60739 113 aaKnown RBP9□□□□□ -0.97
SF3A3-204ENST00000462258 RAMP1O60894 148 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 SMPD2O60906 423 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 CNOT4O95628 575 aaKnown RBP9□□□□□ -0.97
SF3A3-204ENST00000462258 ARAFP10398 606 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 IMPDH2P12268 514 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 PRG2P13727 222 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 NCF2P19878 526 aaPredicted RBP9□□□□□ -0.97
SF3A3-204ENST00000462258 CXCR1P25024 350 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 IDUAP35475 653 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 ACAA2P42765 397 aaKnown RBP9□□□□□ -0.97
SF3A3-204ENST00000462258 MAP2K6P52564 334 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 RIPPLY3P57055 190 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 ADAM8P78325 824 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 SLC35A1P78382 337 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 CAPRIN1Q14444 709 aaKnown RBP9□□□□□ -0.97
SF3A3-204ENST00000462258 STK11Q15831 433 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF311Q5JNZ3 666 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 KRTAP1-3Q8IUG1 177 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 CCDC103Q8IW40 242 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 C10orf111Q8N326 155 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 CLIP4Q8N3C7 705 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 WFDC11Q8NEX6 87 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 NFKBIDQ8NI38 313 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 PIGTQ969N2 578 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 APH1AQ96BI3 265 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 PIP5K1AQ99755 562 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 USB1Q9BQ65 265 aaKnown RBP9□□□□□ -0.97
SF3A3-204ENST00000462258 SIKE1Q9BRV8 207 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 ADAM19Q9H013 955 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 NPHS2Q9NP85 383 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 NGBQ9NPG2 151 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 SLC52A3Q9NQ40 469 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 VAPAQ9P0L0 249 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9□□□□□ -0.97
SF3A3-204ENST00000462258 DCTN4Q9UJW0 460 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 ZNF232Q9UNY5 417 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 CORO2BQ9UQ03 480 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 TRAPPC4Q9Y296 219 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 SLC9A8Q9Y2E8 581 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 CHST2Q9Y4C5 530 aa9□□□□□ -0.97
SF3A3-204ENST00000462258 ROS1P08922 2347 aa8.99□□□□□ -0.97
SF3A3-204ENST00000462258 ZFHX3Q15911 3703 aa8.99□□□□□ -0.97
SF3A3-204ENST00000462258 ACANP16112 2415 aa8.99□□□□□ -0.97
SF3A3-204ENST00000462258 A0A0G2JND7 137 aa8.99□□□□□ -0.97
SF3A3-204ENST00000462258 A0A1W2PP18 115 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms