RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SNTB1Q13884 538 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 GUSBP1Q15486 140 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 STK32CQ86UX6 486 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 RANBP3LQ86VV4 465 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 CALHM3Q86XJ0 350 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 ZNF610Q8N9Z0 462 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 OR52E4Q8NGH9 312 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 RNF217Q8TC41 542 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 RASSF5Q8WWW0 418 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 C3orf49Q96BT1 292 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 ARL5BQ96KC2 179 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 HOPXQ9BPY8 73 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 NAA11Q9BSU3 229 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 POTEKPQ9BYX7 375 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 TRIM2Q9C040 744 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 MYLK2Q9H1R3 596 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 C12orf49Q9H741 205 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 TMEM27Q9HBJ8 222 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 GP6Q9HCN6 339 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 FANCFQ9NPI8 374 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 ELOVL5Q9NYP7 299 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 KLHL13Q9P2N7 655 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 KCNN3Q9UGI6 736 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 TESQ9UGI8 421 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 TRAPPC4Q9Y296 219 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 ARL2BPQ9Y2Y0 163 aa9.45□□□□□ -0.9
TRAPPC12-213ENST00000461577 PKDREJQ9NTG1 2253 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 ZC3H12DA2A288 527 aaKnown RBP9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 TUBAL3A6NHL2 446 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 ELOA3DA6NLF2 546 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 CCT8L1PA6NM43 557 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 A8MVM7 634 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 FAM220BPB1ANY3 271 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 SMAD9O15198 467 aaKnown RBP9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 DNPH1O43598 174 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 CYTIPO60759 359 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 DCTN3O75935 186 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 LGI1O95970 557 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 CGAP01215 116 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 IFNA14P01570 189 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 C8BP07358 591 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 YES1P07947 543 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 PRF1P14222 555 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 IDUAP35475 653 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 CD79BP40259 229 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 NUDT2P50583 147 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 TLE4Q04727 773 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 BNIP2Q12982 314 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 VEZF1Q14119 521 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 EXOC3L2Q2M3D2 409 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 ELOA3BQ3SY89 546 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 PIGWQ7Z7B1 504 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 ATG4DQ86TL0 474 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 COMTD1Q86VU5 262 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 TUSC5Q8IXB3 177 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 ELOA3Q8NG57 546 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 OR2T12Q8NG77 320 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 PIGXQ8TBF5 258 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 STK35Q8TDR2 534 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 DNAJA4Q8WW22 397 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 C14orf79Q96F83 325 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 ZNF583Q96ND8 569 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 GPATCH1Q9BRR8 931 aaKnown RBP9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 TAPBPLQ9BX59 468 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 RSPO3Q9BXY4 272 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 PLSCR4Q9NRQ2 329 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 MPDZO75970 2070 aa9.44□□□□□ -0.9
TRAPPC12-213ENST00000461577 A0A1B0GWA3 101 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 ELOVL7A1L3X0 281 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 M0R3H8 397 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 NDUFAB1O14561 156 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 EIF1BO60739 113 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 GCM2O75603 506 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 AHSA1O95433 338 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 GPIP06744 558 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 PNMTP11086 282 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 IMPDH2P12268 514 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 KLK2P20151 261 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 FPR1P21462 350 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 GTF2E2P29084 291 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 FAM27E3Q08E93 113 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 CEACAM7Q14002 265 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 OR1Q1Q15612 314 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 OR7A5Q15622 319 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 DUSP7Q16829 419 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 ZNF474Q6S9Z5 364 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 HACD2Q6Y1H2 254 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 BEND4Q6ZU67 534 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 NUFIP2Q7Z417 695 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 MICU2Q8IYU8 434 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 LSMEM1Q8N8F7 131 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 GPR32P1Q8NGA4 272 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 VANGL1Q8TAA9 524 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 LINC01560Q8TB33 94 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 FAM222BQ8WU58 562 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 TAMM41Q96BW9 452 aa9.43□□□□□ -0.9
TRAPPC12-213ENST00000461577 SLC47A1Q96FL8 570 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms