RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 POTEKPQ9BYX7 375 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 MFFQ9GZY8 342 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 C20orf85Q9H1P6 137 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 SLC39A1Q9NY26 324 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 TRPM6Q9BX84 2022 aa13.4□□□□□ -0.26
NCL-207ENST00000461347 A0A1B0GWA3 101 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 EIF1AYO14602 144 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 TRHRP34981 398 aaPredicted RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 EIF1AXP47813 144 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 DLX5P56178 289 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 EEF1A2Q05639 463 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 ZBTB37Q5TC79 503 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 ZNF793Q6ZN11 406 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 PEG10Q86TG7 708 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 ZNF547Q8IVP9 402 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 TET1Q8NFU7 2136 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 PEX11GQ96HA9 241 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 CMKLR1Q99788 373 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 ZFYVE21Q9BQ24 234 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 MBNL1Q9NR56 388 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 CAMK2AQ9UQM7 478 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 SGK494L7N484 410 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 PRMT2P55345 433 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 EXOSC2Q13868 293 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 RPE65Q16518 533 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 RNF113BQ8IZP6 322 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 WFDC6Q9BQY6 131 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 TBL1XR1Q9BZK7 514 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 CYSLTR2Q9NS75 346 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 CIB4A0PJX0 185 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 ANKRD61A6NGH8 418 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 KDM4EB2RXH2 506 aaPredicted RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 H3BUI4 141 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 RDH16O75452 317 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 SIX6O95475 246 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 PLGP00747 810 aaPredicted RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 LIPCP11150 499 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 PXNP49023 591 aaPredicted RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 C1orf61Q13536 156 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 HTR4Q13639 388 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 RUNX3Q13761 415 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 LHX8Q68G74 356 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 ZCCHC12Q6PEW1 402 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 KLHL24Q6TFL4 600 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 POGLUT1Q8NBL1 392 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 OR52R1Q8NGF1 315 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 ZNF436Q9C0F3 470 aaPredicted RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 AUNIPQ9H7T9 357 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 POT1Q9NUX5 634 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 EVA1BQ9NVM1 165 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 SC5DO75845 299 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 ATP1B1P05026 303 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 S100A9P06702 114 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 FAAP20Q6NZ36 180 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 RPL22L1Q6P5R6 122 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 OR2A1Q8NGT9 310 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 WDR92Q96MX6 357 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 SFXN2Q96NB2 322 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 SIGLEC11Q96RL6 698 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 SDF2Q99470 211 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 PPA2Q9H2U2 334 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 IL21RQ9HBE5 538 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 NRIP3Q9NQ35 241 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 WASH6PQ9NQA3 447 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 PRTFDC1Q9NRG1 225 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 KCNN3Q9UGI6 736 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 CBLCQ9ULV8 474 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 LSM2Q9Y333 95 aaKnown RBP13.39□□□□□ -0.27
NCL-207ENST00000461347 DOCK4Q8N1I0 1966 aa13.39□□□□□ -0.27
NCL-207ENST00000461347 TMEM72A0PK05 275 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 F5H5P2 479 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 HCRTR2O43614 444 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 CDC40O60508 579 aaKnown RBP eCLIP13.38□□□□□ -0.272e-7■□□□□ 10.7
NCL-207ENST00000461347 AMY2AP04746 511 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 MAKP20794 623 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 C5AR1P21730 350 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 PRSS3P35030 304 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 PCBP4P57723 403 aaKnown RBP13.38□□□□□ -0.27
NCL-207ENST00000461347 RAP2BP61225 183 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 TNFRSF17Q02223 184 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 ZNF770Q6IQ21 691 aaPredicted RBP13.38□□□□□ -0.27
NCL-207ENST00000461347 ARSKQ6UWY0 536 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 BTN2A1Q7KYR7 527 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 FOXRED2Q8IWF2 684 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 ZNF511Q8NB15 262 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 OR52I2Q8NH67 350 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 SLC6A18Q96N87 628 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 APOOQ9BUR5 198 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 TMEM168Q9H0V1 697 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 TREM1Q9NP99 234 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 IL20Q9NYY1 176 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 ARPC4-TTLL3A0A0A6YYG9 625 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 CHP2O43745 196 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 PUDPQ08623 228 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 ZNF77Q15935 545 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 SPERTQ8NA61 448 aa13.38□□□□□ -0.27
NCL-207ENST00000461347 TRIM43Q96BQ3 446 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms