RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZNF607Q96SK3 696 aa13.7□□□□□ -0.22
VARS-219ENST00000461328 CCDC134Q9H6E4 229 aa13.7□□□□□ -0.22
VARS-219ENST00000461328 GP6Q9HCN6 339 aa13.7□□□□□ -0.22
VARS-219ENST00000461328 SLC13A4Q9UKG4 626 aa13.7□□□□□ -0.22
VARS-219ENST00000461328 FRS3O43559 492 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 CYTIPO60759 359 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 PMS2P2O95744 297 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 YES1P07947 543 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 PRG2P13727 222 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 GPX2P18283 190 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 KLK2P20151 261 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 CRYGSP22914 178 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 CLK1P49759 484 aaKnown RBP13.69□□□□□ -0.22
VARS-219ENST00000461328 NCALDP61601 193 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 CAPRIN1Q14444 709 aaKnown RBP13.69□□□□□ -0.22
VARS-219ENST00000461328 TRMT5Q32P41 509 aaKnown RBP13.69□□□□□ -0.22
VARS-219ENST00000461328 NUFIP2Q7Z417 695 aaKnown RBP13.69□□□□□ -0.22
VARS-219ENST00000461328 C11orf65Q8NCR3 313 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 HIPK4Q8NE63 616 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 ARL5BQ96KC2 179 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 PSD2Q9BQI7 771 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 CXXC4Q9H2H0 198 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 TMEM38AQ9H6F2 299 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 EMC3Q9P0I2 261 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 RPS6KB2Q9UBS0 482 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 GMEB1Q9Y692 573 aa13.69□□□□□ -0.22
VARS-219ENST00000461328 TEP1Q99973 2627 aaKnown RBP13.69□□□□□ -0.22
VARS-219ENST00000461328 AKAP6Q13023 2319 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 PRORSD1PA6NEY8 169 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 ZNF208O43345 1280 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 ATE1O95260 518 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 PRKAR1BP31321 381 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 ACAA2P42765 397 aaKnown RBP13.68□□□□□ -0.22
VARS-219ENST00000461328 KLF10Q13118 480 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 SELPLGQ14242 412 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 TFAP2EQ6VUC0 442 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 MTDHQ86UE4 582 aaKnown RBP13.68□□□□□ -0.22
VARS-219ENST00000461328 LSRQ86X29 649 aaPredicted RBP13.68□□□□□ -0.22
VARS-219ENST00000461328 PIGXQ8TBF5 258 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 ZNF775Q96BV0 537 aaPredicted RBP13.68□□□□□ -0.22
VARS-219ENST00000461328 MBD6Q96DN6 1003 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 PIK3IP1Q96FE7 263 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 ZNF300Q96RE9 604 aaPredicted RBP13.68□□□□□ -0.22
VARS-219ENST00000461328 TMEM181Q9P2C4 612 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 CAPN7Q9Y6W3 813 aa13.68□□□□□ -0.22
VARS-219ENST00000461328 A0A1W2PPR1 153 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 BBIP1A8MTZ0 92 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 DEFB108AA8MXU0 73 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 MRASO14807 208 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 DNPH1O43598 174 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 SERPINB7O75635 380 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 PPP3CBP16298 524 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 IDUAP35475 653 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 MAP2K6P52564 334 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 SLC35A1P78382 337 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 HOXC5Q00444 222 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 RBBP4Q09028 425 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 CYLC2Q14093 348 aaPredicted RBP13.67□□□□□ -0.22
VARS-219ENST00000461328 REP15Q6BDI9 236 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 ABLIM2Q6H8Q1 611 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 DHRS4L2Q6PKH6 230 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 STAC2Q6ZMT1 411 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 SNX32Q86XE0 403 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 ARMC8Q8IUR7 673 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 ZNF100Q8IYN0 542 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 ALPK1Q96QP1 1244 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 NAA11Q9BSU3 229 aaPredicted RBP13.67□□□□□ -0.22
VARS-219ENST00000461328 ADAM19Q9H013 955 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 BCO1Q9HAY6 547 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 SAR1AQ9NR31 198 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 CHST2Q9Y4C5 530 aa13.67□□□□□ -0.22
VARS-219ENST00000461328 ZC3H12DA2A288 527 aaKnown RBP13.66□□□□□ -0.22
VARS-219ENST00000461328 ZNF724A8MTY0 619 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 FBP2O00757 339 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 SIAH2O43255 324 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 GPIP06744 558 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 IL32P24001 234 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 RGS8P57771 180 aaPredicted RBP13.66□□□□□ -0.22
VARS-219ENST00000461328 BNIP2Q12982 314 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 ADRM1Q16186 407 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 DEFB113Q30KQ7 82 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.66□□□□□ -0.22
VARS-219ENST00000461328 GALNT5Q7Z7M9 940 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 CXorf67Q86X51 503 aaPredicted RBP13.66□□□□□ -0.22
VARS-219ENST00000461328 BHLHE22Q8NFJ8 381 aaPredicted RBP13.66□□□□□ -0.22
VARS-219ENST00000461328 OR10A6Q8NH74 314 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 RNF217Q8TC41 542 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 C10orf82Q8WW14 230 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 SLC35B4Q969S0 331 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 SH3GL1Q99961 368 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 TAPBPLQ9BX59 468 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 ACTR6Q9GZN1 396 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 SELENONQ9NZV5 590 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 PRDM4Q9UKN5 801 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 TRAPPC4Q9Y296 219 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 GPR52Q9Y2T5 361 aa13.66□□□□□ -0.22
VARS-219ENST00000461328 ABCA4P78363 2273 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms