RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 PTH2RP49190 550 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 P2RX1P51575 399 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 SIRPAP78324 504 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 RBBP4Q09028 425 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 QPRTQ15274 297 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 EEF1A1P5Q5VTE0 462 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 RAET1LQ5VY80 246 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 C20orf204Q6ZNR8 217 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 TRPM8Q7Z2W7 1104 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 SMYD1Q8NB12 490 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 FAM156AQ8NDB6 213 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 GPR32P1Q8NGA4 272 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 OR5W2Q8NH69 310 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 REXO5Q96IC2 774 aaKnown RBP13.14□□□□□ -0.31
NCK1-202ENST00000460960 NSL1Q96IY1 281 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 RNF145Q96MT1 663 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 SH3GL1Q99961 368 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 HOPXQ9BPY8 73 aaPredicted RBP13.14□□□□□ -0.31
NCK1-202ENST00000460960 PIGQQ9BRB3 760 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 TMEM181Q9P2C4 612 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 ANGPT4Q9Y264 503 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 SLC35A3Q9Y2D2 325 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 ZNF337Q9Y3M9 751 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 RNF212BA8MTL3 300 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 M0QX08 132 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 MSTNO14793 375 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 EIF4E2O60573 245 aaKnown RBP13.13□□□□□ -0.31
NCK1-202ENST00000460960 TNFSF13O75888 250 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 TGM6O95932 706 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 THBS1P07996 1170 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 POU2F1P14859 743 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 PRKCAP17252 672 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 CRYGSP22914 178 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 CHMP24386 653 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 CD79BP40259 229 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 ACAA2P42765 397 aaKnown RBP13.13□□□□□ -0.31
NCK1-202ENST00000460960 LHX2P50458 406 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 CLDN15P56746 228 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 GNA13Q14344 377 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 GANABQ14697 944 aaKnown RBP13.13□□□□□ -0.31
NCK1-202ENST00000460960 LIN52Q52LA3 116 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 ZNF311Q5JNZ3 666 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 RNF220Q5VTB9 566 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 VWA1Q6PCB0 445 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 AAGABQ6PD74 315 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 MICU2Q8IYU8 434 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 METTL25Q8N6Q8 603 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 RBM15BQ8NDT2 890 aaKnown RBP13.13□□□□□ -0.31
NCK1-202ENST00000460960 OR2T12Q8NG77 320 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 PRR14Q9BWN1 585 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 SPATA9Q9BWV2 254 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 OPN3Q9H1Y3 402 aaPredicted RBP13.13□□□□□ -0.31
NCK1-202ENST00000460960 PTGES2Q9H7Z7 377 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 MRPS18CQ9Y3D5 142 aaKnown RBP13.13□□□□□ -0.31
NCK1-202ENST00000460960 ZANQ9Y493 2812 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 ATRQ13535 2644 aa13.13□□□□□ -0.31
NCK1-202ENST00000460960 PRORSD1PA6NEY8 169 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 B2RBV5 119 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 NTN1O95631 604 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 NCK1P16333 377 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 CD247P20963 164 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 MSX2P35548 267 aaPredicted RBP13.12□□□□□ -0.31
NCK1-202ENST00000460960 ZNF41P51814 821 aaPredicted RBP13.12□□□□□ -0.31
NCK1-202ENST00000460960 SUCLG1P53597 346 aaKnown RBP13.12□□□□□ -0.31
NCK1-202ENST00000460960 NR1H2P55055 460 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 SUMO3P55854 103 aaPredicted RBP13.12□□□□□ -0.31
NCK1-202ENST00000460960 CLDN18P56856 261 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 CLDN20P56880 219 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 SESN3P58005 492 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 CBX1P83916 185 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 DUSP7Q16829 419 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 ANKRD34AQ69YU3 496 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 PLEKHM3Q6ZWE6 761 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 ARPINQ7Z6K5 226 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 ADGRE4PQ86SQ3 457 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 UBQLNLQ8IYU4 475 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 DEFB107AQ8IZN7 70 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 PGAM4Q8N0Y7 254 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 OR4D11Q8NGI4 311 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 OIT3Q8WWZ8 545 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 PMM1Q92871 262 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 TMEM185BQ9H7F4 350 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 EXOSC3Q9NQT5 275 aaKnown RBP13.12□□□□□ -0.31
NCK1-202ENST00000460960 ADA2Q9NZK5 511 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 USF3Q68DE3 2245 aa13.12□□□□□ -0.31
NCK1-202ENST00000460960 ROS1P08922 2347 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 ELOVL7A1L3X0 281 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 SLC22A20A6NK97 555 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 H3BML4 177 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 TPST2O60704 377 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 CRLF1O75462 422 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 PEPDP12955 493 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 TNFRSF1BP20333 461 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 UGT2B10P36537 528 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 IDH2P48735 452 aaKnown RBP13.11□□□□□ -0.31
NCK1-202ENST00000460960 EEFSECP57772 596 aaKnown RBP13.11□□□□□ -0.31
NCK1-202ENST00000460960 EPS8Q12929 822 aa13.11□□□□□ -0.31
NCK1-202ENST00000460960 CBFBQ13951 182 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms