RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CDH12P55289 794 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 CARD18P57730 90 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 MS4A2Q01362 244 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 MYBPHQ13203 477 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 SGCBQ16585 318 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 PDSS1Q5T2R2 415 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 RIPPLY2Q5TAB7 128 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 PPP4R4Q6NUP7 873 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 MTFR2Q6P444 385 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 DEF8Q6ZN54 512 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 TMPPEQ6ZT21 453 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 MRGPRGQ86SM5 289 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 ARHGAP24Q8N264 748 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 SSC4DQ8WTU2 575 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 ROBO4Q8WZ75 1007 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 LZICQ8WZA0 190 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 RND1Q92730 232 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 WNT2BQ93097 391 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 BTBD10Q9BSF8 475 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 THTPAQ9BU02 230 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 PRPF19Q9UMS4 504 aaKnown RBP12.54□□□□□ -0.4
HDLBP-229ENST00000460826 ZNF175Q9Y473 711 aa12.54□□□□□ -0.4
HDLBP-229ENST00000460826 IGKV1D-42A0A075B6H8 117 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 IGHV3-15A0A0B4J1V0 119 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 ELOA3DA6NLF2 546 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-229ENST00000460826 NPIPB7O75200 414 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 FUT4P22083 530 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 DIO1P49895 249 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 EGR4Q05215 589 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 FOXF2Q12947 444 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 ZNF239Q16600 458 aaKnown RBP12.53□□□□□ -0.4
HDLBP-229ENST00000460826 ELOA3BQ3SY89 546 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 DNAL1Q4LDG9 190 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 IFI44LQ53G44 452 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 ALG10BQ5I7T1 473 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 ZNF613Q6PF04 617 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 ULK3Q6PHR2 472 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 CYP2R1Q6VVX0 501 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 WDR88Q6ZMY6 472 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 P4HA3Q7Z4N8 544 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 TSEN54Q7Z6J9 526 aaKnown RBP12.53□□□□□ -0.4
HDLBP-229ENST00000460826 LIX1LQ8IVB5 337 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 P3H2Q8IVL5 708 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 GCNT2Q8N0V5 402 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 ELOA3Q8NG57 546 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 RNF217Q8TC41 542 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 ADAMTS16Q8TE57 1224 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 DNAJA4Q8WW22 397 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-229ENST00000460826 SLC38A4Q969I6 547 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 SDCCAG3Q96C92 435 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 DDIT4LQ96D03 193 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 SLC47A1Q96FL8 570 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 NSMCE2Q96MF7 247 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 AMBRA1Q9C0C7 1298 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 C12orf10Q9HB07 376 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 RPS6KA6Q9UK32 745 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 HDGFL3Q9Y3E1 203 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 V9GYQ6 96 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 HCFC1P51610 2035 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 HECTD1Q9ULT8 2610 aa12.53□□□□□ -0.4
HDLBP-229ENST00000460826 A8MVM7 634 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 SULT2B1O00204 365 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 SMAD9O15198 467 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 GMNNO75496 209 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 PRKD3O94806 890 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 RCBTB2O95199 551 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 SYNGR4O95473 234 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 IL2RAP01589 272 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 ENPP1P22413 925 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 YAP1P46937 504 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 CLK1P49759 484 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 SMSP52788 366 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 RAC3P60763 192 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 PIN1Q13526 163 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 TRIM25Q14258 630 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 C1orf140Q5VVS0 124 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 PGM2L1Q6PCE3 622 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 FKBP9P1Q75LS8 142 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 GDF7Q7Z4P5 450 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 ZNF808Q8N4W9 903 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 GEMIN6Q8WXD5 167 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 INTS12Q96CB8 462 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 CCDC124Q96CT7 223 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 KTI12Q96EK9 354 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 SLC41A3Q96GZ6 507 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 TM9SF2Q99805 663 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 PTDSS2Q9BVG9 487 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 CADM1Q9BY67 442 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 POTEKPQ9BYX7 375 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 PAQR5Q9NXK6 330 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 ACTR3BQ9P1U1 418 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 MCTS1Q9ULC4 181 aaKnown RBP12.52□□□□□ -0.41
HDLBP-229ENST00000460826 SLC7A7Q9UM01 511 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 CLEC4AQ9UMR7 237 aa12.52□□□□□ -0.41
HDLBP-229ENST00000460826 A0A087WUJ7 227 aa12.51□□□□□ -0.41
HDLBP-229ENST00000460826 TRAPPC13A5PLN9 417 aa12.51□□□□□ -0.41
HDLBP-229ENST00000460826 ZNF814B7Z6K7 855 aa12.51□□□□□ -0.41
HDLBP-229ENST00000460826 J3KTA2 159 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms