RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 PRAMEF8Q5VWM4 474 aa10.76□□□□□ -0.69
NPHP4-204ENST00000460696 PRAMEF7Q5VXH5 474 aa10.76□□□□□ -0.69
NPHP4-204ENST00000460696 KIAA0907Q7Z7F0 614 aaPredicted RBP10.76□□□□□ -0.69
NPHP4-204ENST00000460696 SYT9Q86SS6 491 aa10.76□□□□□ -0.69
NPHP4-204ENST00000460696 NRSN2Q9GZP1 204 aa10.76□□□□□ -0.69
NPHP4-204ENST00000460696 FOLH1BQ9HBA9 442 aa10.76□□□□□ -0.69
NPHP4-204ENST00000460696 FSCN3Q9NQT6 498 aa10.76□□□□□ -0.69
NPHP4-204ENST00000460696 SESN1Q9Y6P5 492 aa10.76□□□□□ -0.69
NPHP4-204ENST00000460696 TCF20Q9UGU0 1960 aaKnown RBP10.76□□□□□ -0.69
NPHP4-204ENST00000460696 TEX13CA0A0J9YWL9 993 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 A0A1W2PQ72 361 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 PRAMEF25A6NGN4 478 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 EML2O95834 649 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 IFNA6P05013 189 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 FBLP22087 321 aaKnown RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 AQP2P41181 271 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF81P51508 661 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 KIAA1024LP59773 190 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ARHGAP11BQ3KRB8 267 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 TCTE1Q5JU00 501 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 FAM27D1Q5T7N8 215 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 PYHIN1Q6K0P9 492 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 VN1R4Q7Z5H5 301 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 TMED4Q7Z7H5 227 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF511Q8NB15 262 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 OR2T4Q8NH00 348 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 OR51Q1Q8NH59 317 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 SLC6A18Q96N87 628 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 WFDC6Q9BQY6 131 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ANKRD19PQ9H560 264 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 FBXO34Q9NWN3 711 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 TDRD6O60522 2096 aaKnown RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 TRIM64A6NGJ6 449 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 A6NL46 340 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 NPIPA5E9PKD4 350 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 P2RX6O15547 441 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 SLC35E2P0CK97 266 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 CPEP16870 476 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 GMFBP60983 142 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 SERTAD2Q14140 314 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 INSL4Q14641 139 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 HDDC2Q7Z4H3 204 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ABHD4Q8TB40 342 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 NPIPA1Q9UND3 350 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ADAM18Q9Y3Q7 739 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 MYO18BQ8IUG5 2567 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 HMX3A6NHT5 357 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 OR8G3PP0DMU2 310 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 CLUP10909 449 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 UBL4AP11441 157 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 COL9A1P20849 921 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 MAPK3P27361 379 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 DUSP2Q05923 314 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 SF3B4Q15427 424 aaKnown RBP eCLIP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 SF3A2Q15428 464 aaKnown RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 TMPRSS9Q7Z410 1059 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 GPAT4Q86UL3 456 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 NOXA1Q86UR1 476 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 OR4Q3Q8NH05 313 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 FCAMRQ8WWV6 532 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 EDAQ92838 391 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 OR10A5Q9H207 317 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ISG20L2Q9H9L3 353 aaKnown RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 HRO43593 1189 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF217O75362 1048 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 GIFP27352 417 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 CD38P28907 300 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 CRYBA2P53672 197 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ADAM8P78325 824 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 BTG2P78543 158 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF227Q86WZ6 799 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 SLC35B4Q969S0 331 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 TXNDC15Q96J42 360 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 PDCD1LG2Q9BQ51 273 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 PELOQ9BRX2 385 aaKnown RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 OR10A4Q9H209 315 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 REV1Q9UBZ9 1251 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 GPN3Q9UHW5 284 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 KLHL21Q9UJP4 597 aa10.75□□□□□ -0.69
NPHP4-204ENST00000460696 MRPS2Q9Y399 296 aaKnown RBP10.75□□□□□ -0.69
NPHP4-204ENST00000460696 TMEM72A0PK05 275 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 OR5K3A6NET4 321 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 TNFRSF10CO14798 259 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SPINT1O43278 529 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SSX4O60224 188 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 TBX19O60806 448 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SBK2P0C263 348 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 MAKP20794 623 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 ERP29P30040 261 aaKnown RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 PRPS1P60891 318 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 EEF1A2Q05639 463 aaKnown RBP10.74□□□□□ -0.69
NPHP4-204ENST00000460696 DUSP8Q13202 625 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SQSTM1Q13501 440 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 SCGB2B2Q4G0G5 96 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 KIAA0895LQ68EN5 471 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 ZNF440Q8IYI8 595 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 OR8D4Q8NGM9 314 aa10.74□□□□□ -0.69
NPHP4-204ENST00000460696 OR52N1Q8NH53 320 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms