RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 IL12BP29460 328 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 IDUAP35475 653 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 CRYBB2P43320 205 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 RORCP51449 518 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 DUSP3P51452 185 aaPredicted RBP12.93□□□□□ -0.34
ERCC3-205ENST00000460485 SKP2Q13309 424 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 IL10RAQ13651 578 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 ERV3-1Q14264 604 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 EBPQ15125 230 aaKnown RBP12.93□□□□□ -0.34
ERCC3-205ENST00000460485 SHBQ15464 509 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 ELOA3BQ3SY89 546 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 SLC35D3Q5M8T2 416 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 SPANXN2Q5MJ10 180 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 CD200R1LQ6Q8B3 271 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 KIRREL2Q6UWL6 708 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 DPY19L2P2Q6ZN68 376 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 CPOQ8IVL8 374 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 CADM2Q8N3J6 435 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 METTL27Q8N6F8 245 aaPredicted RBP12.93□□□□□ -0.34
ERCC3-205ENST00000460485 ELOA3Q8NG57 546 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 OR4N2Q8NGD1 307 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 SAP25Q8TEE9 199 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 ADIPOR1Q96A54 375 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 C3orf49Q96BT1 292 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 KCTD7Q96MP8 289 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 CDADC1Q9BWV3 514 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 SLC7A5P2Q9GIP4 190 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 NUAK2Q9H093 628 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 KCNN2Q9H2S1 579 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 EXOSC4Q9NPD3 245 aaKnown RBP12.93□□□□□ -0.34
ERCC3-205ENST00000460485 MEPEQ9NQ76 525 aaPredicted RBP12.93□□□□□ -0.34
ERCC3-205ENST00000460485 TRIM36Q9NQ86 728 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 C20orf141Q9NUB4 165 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 FAIMQ9NVQ4 179 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 ERVK13-1Q9NX77 482 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 CLEC2DQ9UHP7 191 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 GPR52Q9Y2T5 361 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 SPIN1Q9Y657 262 aaPredicted RBP12.93□□□□□ -0.34
ERCC3-205ENST00000460485 CABIN1Q9Y6J0 2220 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 RP1P56715 2156 aa12.93□□□□□ -0.34
ERCC3-205ENST00000460485 ALG1L2C9J202 215 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 J3QRE1 110 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 GPX5O75715 221 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 SULT1C4O75897 302 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 OR7A10O76100 309 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 UTS2O95399 124 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 CER1O95813 267 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 ADRA2AP08913 450 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 CKMT1AP12532 417 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 BMP4P12644 408 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 CD59P13987 128 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 FOLR1P15328 257 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 NOS3P29474 1203 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 NRG3P56975 720 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 FXYD6P3P58550 94 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 RPS4XP62701 263 aaKnown RBP12.92□□□□□ -0.34
ERCC3-205ENST00000460485 CFHR1Q03591 330 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 CRYZQ08257 329 aaKnown RBP12.92□□□□□ -0.34
ERCC3-205ENST00000460485 TRA2AQ13595 282 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERCC3-205ENST00000460485 EFR3AQ14156 821 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 KCNAB1Q14722 419 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 TRIP6Q15654 476 aaKnown RBP12.92□□□□□ -0.34
ERCC3-205ENST00000460485 NSDHLQ15738 373 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 ZNF485Q8NCK3 441 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 OR13C2Q8NGS9 318 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 WDFY2Q96P53 400 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 UBL7Q96S82 380 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-205ENST00000460485 CCDC32Q9BV29 185 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 ASPNQ9BXN1 380 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 MROQ9BYG7 248 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 OR8D2Q9GZM6 311 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 C6orf62Q9GZU0 229 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-205ENST00000460485 NXF5Q9H1B4 397 aaKnown RBP12.92□□□□□ -0.34
ERCC3-205ENST00000460485 ATP13A2Q9NQ11 1180 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 PPIEQ9UNP9 301 aaKnown RBP12.92□□□□□ -0.34
ERCC3-205ENST00000460485 NOX1Q9Y5S8 564 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 MAU2Q9Y6X3 613 aa12.92□□□□□ -0.34
ERCC3-205ENST00000460485 SEC16AO15027 2179 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 GTPBP1O00178 669 aaKnown RBP12.91□□□□□ -0.34
ERCC3-205ENST00000460485 CH25HO95992 272 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 PGCP20142 388 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 SOX3P41225 446 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 GRK6P43250 576 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 OR1D4P47884 311 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 RNF144AP50876 292 aaPredicted RBP12.91□□□□□ -0.34
ERCC3-205ENST00000460485 ACTA2P62736 377 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 ACTG2P63267 376 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 HSF2Q03933 536 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 PLCXD2Q0VAA5 305 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 GGTLC2Q14390 218 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 EMC4Q5J8M3 183 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 LIPKQ5VXJ0 399 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 BCDIN3DQ7Z5W3 292 aaKnown RBP12.91□□□□□ -0.34
ERCC3-205ENST00000460485 ZNF441Q8N8Z8 693 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 Q8N9G6 341 aaPredicted RBP12.91□□□□□ -0.34
ERCC3-205ENST00000460485 ZSCAN1Q8NBB4 408 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms