RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 B3GALT6Q96L58 329 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 MAGEB18Q96M61 343 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 TBX15Q96SF7 602 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 NICN1Q9BSH3 213 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 PARD6BQ9BYG5 372 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 VCPKMTQ9H867 229 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 FN3KRPQ9HA64 309 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 DCDC2Q9UHG0 476 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 CTNNA3Q9UI47 895 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 ADAM28Q9UKQ2 775 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 ASB3Q9Y575 518 aa3.98□□□□□ -1.77
CCDC50-203ENST00000460064 HIP1O00291 1037 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 DIRAS1O95057 198 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 LYPD3O95274 346 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 IGHG4P01861 327 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 GZMAP12544 262 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 PBLDP30039 288 aaPredicted RBP3.97□□□□□ -1.77
CCDC50-203ENST00000460064 CCR1P32246 355 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 MAP3K8P41279 467 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 BTDP43251 543 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 PKNOX1P55347 436 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 RPS14P62263 151 aaKnown RBP3.97□□□□□ -1.77
CCDC50-203ENST00000460064 ZNF45Q02386 682 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 KLRB1Q12918 225 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 SLC15A2Q16348 729 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 HSP90B2PQ58FF3 399 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 C1orf220Q5T0J3 134 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 C14orf178Q8N769 122 aaPredicted RBP3.97□□□□□ -1.77
CCDC50-203ENST00000460064 BRSK1Q8TDC3 778 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 ZNF75CPQ92670 426 aaPredicted RBP3.97□□□□□ -1.77
CCDC50-203ENST00000460064 TIMD4Q96H15 378 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 SEC22AQ96IW7 307 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 SMIM14Q96QK8 99 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 CLCC1Q96S66 551 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 COPS8Q99627 209 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 KLHDC3Q9BQ90 382 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 REEP4Q9H6H4 257 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 MCCC2Q9HCC0 563 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 HYPKQ9NX55 129 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 CD274Q9NZQ7 290 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 B4GALT7Q9UBV7 327 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 SUN2Q9UH99 717 aa3.97□□□□□ -1.77
CCDC50-203ENST00000460064 NBR2O15453 112 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 MED7O43513 233 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 TIMM8AO60220 97 aaPredicted RBP3.96□□□□□ -1.78
CCDC50-203ENST00000460064 FCMRO60667 390 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 SNX4O95219 450 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 RBMY1CP0DJD4 496 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 CALCRP30988 508 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 SH3BGRP55822 239 aaPredicted RBP3.96□□□□□ -1.78
CCDC50-203ENST00000460064 MECOMQ03112 1051 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 RSBN1Q5VWQ0 802 aaPredicted RBP3.96□□□□□ -1.78
CCDC50-203ENST00000460064 UNQ9370/PRO34162Q6UXP9 181 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 UTS2BQ765I0 119 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 ZNF584Q8IVC4 421 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 FBXL16Q8N461 479 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 C11orf42Q8N5U0 333 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 OR13C2Q8NGS9 318 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 C10orf35Q96D05 121 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 C16orf74Q96GX8 76 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 CNDP1Q96KN2 507 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 TCEANC2Q96MN5 208 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 NHEJ1Q9H9Q4 299 aaPredicted RBP3.96□□□□□ -1.78
CCDC50-203ENST00000460064 TMEM9Q9P0T7 183 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 PLEKHH1Q9ULM0 1364 aa3.96□□□□□ -1.78
CCDC50-203ENST00000460064 KANK1Q14678 1352 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 A0A0G2JRQ6 117 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 A0A1B0GVL5 298 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 SNTNA6NMZ2 147 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 CYSRT1A8MQ03 144 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 DCTN6O00399 190 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 PRKAB2O43741 272 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 UGT1A9O60656 530 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 LY6G6DO95868 133 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 HTR1FP30939 366 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 TAGLN2P37802 199 aaKnown RBP3.95□□□□□ -1.78
CCDC50-203ENST00000460064 PTGDSP41222 190 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 RGRP47804 291 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 DUSP3P51452 185 aaPredicted RBP3.95□□□□□ -1.78
CCDC50-203ENST00000460064 ATP1B3P54709 279 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 STX17P56962 302 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 RIPPLY3P57055 190 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
CCDC50-203ENST00000460064 EGFEM1PQ0D2K5 195 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 NSUN5P1Q3KNT7 163 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 RABL6Q3YEC7 729 aaPredicted RBP3.95□□□□□ -1.78
CCDC50-203ENST00000460064 HSDL2Q6YN16 418 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 GDPD3Q7L5L3 318 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 FAM220AQ7Z4H9 259 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 DHDDSQ86SQ9 333 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 VRK2Q86Y07 508 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 SPAG16Q8N0X2 631 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 FTMTQ8N4E7 242 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 ALLCQ8N6M5 410 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 OR2AP1Q8NGE2 309 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 OR52H1Q8NGJ2 320 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 MAGEE2Q8TD90 523 aaPredicted RBP3.95□□□□□ -1.78
CCDC50-203ENST00000460064 FGF11Q92914 225 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 CXorf40BQ96DE9 158 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 GSDMAQ96QA5 445 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms