RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SLC6A8P48029 635 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 DIO1P49895 249 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 BLVRAP53004 296 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 CAV3P56539 151 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 VSX2P58304 361 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 GNG2P59768 71 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 SIRPAP78324 504 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 PSG6Q00889 435 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 CD83Q01151 205 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 HHEXQ03014 270 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF85Q03923 595 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 SLC3A1Q07837 685 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 CRYZQ08257 329 aaKnown RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 HYAL1Q12794 435 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 FZD5Q13467 585 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 NTRK2Q16620 822 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 PRTGQ2VWP7 1150 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 PLA1AQ53H76 456 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 FAAH2Q6GMR7 532 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 THOC7Q6I9Y2 204 aaKnown RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 WBP2NLQ6ICG8 309 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 LRRN1Q6UXK5 716 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 THSD4Q6ZMP0 1018 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 TAF8Q7Z7C8 310 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 TOMM5Q8N4H5 51 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF614Q8N883 585 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 YIPF7Q8N8F6 280 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 OR4M2Q8NGB6 313 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 OR52E2Q8NGJ4 325 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 OR51A7Q8NH64 312 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 RPS4Y2Q8TD47 263 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 SLC37A2Q8TED4 501 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 RAB40AQ8WXH6 277 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 CNOT9Q92600 299 aaKnown RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 GHSRQ92847 366 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 UPRTQ96BW1 309 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 SLC28A3Q9HAS3 691 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 PRTFDC1Q9NRG1 225 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 GPR27Q9NS67 375 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 FLRT3Q9NZU0 649 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 USP36Q9P275 1121 aaKnown RBP8.14□□□□□ -1.11
HDAC3-202ENST00000459727 MALT1Q9UDY8 824 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 IL20RAQ9UHF4 553 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 ST6GALNAC2Q9UJ37 374 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 KCNE5Q9UJ90 142 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 MMP17Q9ULZ9 603 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 OR10H1Q9Y4A9 318 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 TMEM14AQ9Y6G1 99 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 MAU2Q9Y6X3 613 aa8.14□□□□□ -1.11
HDAC3-202ENST00000459727 CCDC88CQ9P219 2028 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 TRAV27A0A087WT01 109 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 A0A0B4J293 547 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 A0A0G2JK05 382 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 TRBV2A0A0J9YWF9 115 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 CENPVL1A0A0U1RR11 272 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 SPTY2D1-AS1A0A0U1RR47 76 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 TCRBV21S2A2A0A5A6 115 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 HRO43593 1189 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 HYAL3O43820 417 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-202ENST00000459727 RDH16O75452 317 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 RFPL3O75679 317 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 NCR1O76036 304 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 GLCEO94923 617 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 ALX3O95076 343 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 EPXP11678 715 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 HPGDP15428 266 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 SHC1P29353 583 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 MNDAP41218 407 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 EMDP50402 254 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 DCAF7P61962 342 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 RPS4XP62701 263 aaKnown RBP8.13□□□□□ -1.11
HDAC3-202ENST00000459727 ID2Q02363 134 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 FUT7Q11130 342 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 GPR176Q14439 515 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 EXOSC7Q15024 291 aaKnown RBP8.13□□□□□ -1.11
HDAC3-202ENST00000459727 GPR139Q6DWJ6 353 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 UNQ9370/PRO34162Q6UXP9 181 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 MED25Q71SY5 747 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 JAZF1Q86VZ6 243 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 PARGQ86W56 976 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 MCATQ8IVS2 390 aaKnown RBP8.13□□□□□ -1.11
HDAC3-202ENST00000459727 SDR16C5Q8N3Y7 309 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 OR56B4Q8NH76 319 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 CCL4L1Q8NHW4 92 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF671Q8TAW3 534 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 SMIM4Q8WVI0 70 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 THAP4Q8WY91 577 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 TTC9Q92623 222 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 RNF31Q96EP0 1072 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 SCMH1Q96GD3 660 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 SENP5Q96HI0 755 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-202ENST00000459727 RADILQ96JH8 1075 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 ART5Q96L15 291 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 DMRTB1Q96MA1 342 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 TNFRSF13CQ96RJ3 184 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 DCLRE1CQ96SD1 692 aaKnown RBP8.13□□□□□ -1.11
HDAC3-202ENST00000459727 TBX5Q99593 518 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 TIMP4Q99727 224 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 S1PR5Q9H228 398 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 MED20Q9H944 212 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms