RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 NUBPLQ8TB37 319 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 MRAPQ8TCY5 172 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ZNF398Q8TD17 642 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SLC2A12Q8TD20 617 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 BLOC1S5Q8TDH9 187 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 PPP4R1Q8TF05 950 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SNX33Q8WV41 574 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 APH1BQ8WW43 257 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SOCS4Q8WXH5 440 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 TFAP2CQ92754 450 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SCAMP4Q969E2 229 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 LHX4Q969G2 390 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SLC25A28Q96A46 364 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 MOAP1Q96BY2 351 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 DCPSQ96C86 337 aaKnown RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 COQ8BQ96D53 544 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ZNF486Q96H40 463 aaPredicted RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 SENP5Q96HI0 755 aaPredicted RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 FOPNLQ96NB1 174 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 LRRC3BQ96PB8 259 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 MYOCQ99972 504 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SIK2Q9H0K1 926 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 C1orf198Q9H425 327 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 FN3KQ9H479 309 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SLA2Q9H6Q3 261 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SIAEQ9HAT2 523 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 EML4Q9HC35 981 aaKnown RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 RANGRFQ9HD47 186 aaPredicted RBP4.95□□□□□ -1.62
VPS41-209ENST00000457055 SIRT7Q9NRC8 400 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SLC2A9Q9NRM0 540 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 PLEKHJ1Q9NW61 149 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 SPHK1Q9NYA1 384 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 GSKIPQ9P0R6 139 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 COPS7AQ9UBW8 275 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 ZDHHC2Q9UIJ5 367 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 KLHL21Q9UJP4 597 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 GPR132Q9UNW8 380 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 PCDHB7Q9Y5E2 793 aa4.95□□□□□ -1.62
VPS41-209ENST00000457055 TJP1Q07157 1748 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PPIAL4EA0A075B759 164 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 KCNE1BA0A087WTH5 132 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 TRBV11-1A0A0K0K1C0 115 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 CGB1A6NKQ9 187 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 AQP7P3A6NL99 342 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 C9J4A7 227 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PPP6CO00743 305 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PHYHO14832 338 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PSTPIP1O43586 416 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 FCGR3BO75015 233 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 SH3BGRLO75368 114 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PMPCBO75439 489 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 BANF1O75531 89 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 AP2A2O94973 939 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 TSPAN12O95859 305 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 TFP02787 698 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PPIAL4FP0DN26 164 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 ANXA3P12429 323 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 CYP11B1P15538 503 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 CD1EP15812 388 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 ST6GAL1P15907 406 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 IGFBP2P18065 325 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 NPR2P20594 1047 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 GABRR1P24046 479 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 STOMP27105 288 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 CALML3P27482 149 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PSMB4P28070 264 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 FMO4P31512 558 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 COILP38432 576 aaPredicted RBP4.94□□□□□ -1.62
VPS41-209ENST00000457055 PBX1P40424 430 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 NPBWR1P48145 328 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 RFX3P48380 749 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 LIMK2P53671 638 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 UCP3P55916 312 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 RAP1BP61224 184 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 RPS6P62753 249 aaKnown RBP4.94□□□□□ -1.62
VPS41-209ENST00000457055 LCN2P80188 198 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 SLC34A1Q06495 639 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 ARHGAP1Q07960 439 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 FOXI1Q12951 378 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 TNK1Q13470 666 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 GPNMBQ14956 572 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 P2RY14Q15391 338 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 DLG2Q15700 870 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 NDUFA9Q16795 377 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 RNF212Q495C1 297 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 VPS26BQ4G0F5 336 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 C6orf226Q5I0X4 101 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 GCSAMLQ5JQS6 135 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PPM1LQ5SGD2 360 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PMS2CLQ68D20 193 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 FCRL6Q6DN72 434 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 OR52W1Q6IF63 320 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 NIPAL3Q6P499 406 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 RBMS3Q6XE24 437 aaKnown RBP4.94□□□□□ -1.62
VPS41-209ENST00000457055 ACOT7LQ6ZUV0 252 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 CTAGE3PQ8IX95 158 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 LAS2Q8IYD9 372 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 PQLC1Q8N2U9 271 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 SLC44A5Q8NCS7 719 aa4.94□□□□□ -1.62
VPS41-209ENST00000457055 KIAA0895Q8NCT3 520 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms