RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ART1P52961 327 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 METAP1P53582 386 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 DLX5P56178 289 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 PPP2CBP62714 309 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 PPP2CAP67775 309 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 LTB4RQ15722 352 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 TMEM69Q5SWH9 247 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 FAM46CQ5VWP2 391 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 TMEM215Q68D42 235 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 GAREM2Q75VX8 874 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 MUC20Q8N307 709 aaPredicted RBP9.51□□□□□ -0.89
CLIP4-208ENST00000456385 NUP43Q8NFH3 380 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 OR4D10Q8NGI6 311 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 OR51A7Q8NH64 312 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 C1orf216Q8TAB5 229 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF304Q9HCX3 659 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 FANCFQ9NPI8 374 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 NRIP3Q9NQ35 241 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 CMC2Q9NRP2 79 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 COA4Q9NYJ1 87 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 LRFN2Q9ULH4 789 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 FOXJ3Q9UPW0 622 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 TRBV2A0A0J9YWF9 115 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 FAM86C2PA6NEL3 165 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 ANKRD61A6NGH8 418 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 IFITM5A6NNB3 132 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 F5H5P2 479 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 F8W036 122 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 PSMD9O00233 223 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 GPR31O00270 319 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 ITGA10O75578 1167 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 SERPINA3P01011 423 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 VCANP13611 3396 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 SLC2A5P22732 501 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 NAA10P41227 235 aaPredicted RBP9.51□□□□□ -0.89
CLIP4-208ENST00000456385 AKR1C2P52895 323 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 SIRPAP78324 504 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 AKR1C1Q04828 323 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 IL10RAQ13651 578 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 CBFBQ13951 182 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 CDK5R1Q15078 307 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 TCTN1Q2MV58 587 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 OLFML2AQ68BL7 652 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 OVCH1Q7RTY7 1134 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 SLC36A1Q7Z2H8 476 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 SLC16A11Q8NCK7 471 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 OR5T2Q8NGG2 359 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 ZMYND19Q96E35 227 aaPredicted RBP9.51□□□□□ -0.89
CLIP4-208ENST00000456385 SGIP1Q9BQI5 828 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 DNTTIP1Q9H147 329 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 WDR13Q9H1Z4 485 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 BARX1Q9HBU1 254 aaPredicted RBP9.51□□□□□ -0.89
CLIP4-208ENST00000456385 CLDND1Q9NY35 253 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 SPG21Q9NZD8 308 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 CYB5R1Q9UHQ9 305 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
CLIP4-208ENST00000456385 IDSB3KWA1 339 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF749O43361 778 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 HTR2AP28223 471 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 PRKAR1BP31321 381 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF136P52737 540 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 PLA2G7Q13093 441 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 HFEQ30201 348 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 TPGS2Q68CL5 300 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF836Q6ZNA1 936 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 KCT2Q8NC54 265 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 DNAAF1Q8NEP3 725 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 OR2AK2Q8NG84 335 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 OR6K3Q8NGY3 331 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 SOCS4Q8WXH5 440 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 NR4A3Q92570 626 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 NSMAFQ92636 917 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 RAD51AP1Q96B01 352 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 SLC35A4Q96G79 324 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 UTP23Q9BRU9 249 aaKnown RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 CHST6Q9GZX3 395 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 OR52A5Q9H2C5 316 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 SAGE1Q9NXZ1 904 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 OR5V1Q9UGF6 321 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF230Q9UIE0 474 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 GNG8Q9UK08 70 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF223Q9UK11 482 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 CCL26Q9Y258 94 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ZNF443Q9Y2A4 671 aaPredicted RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 DENND4CQ5VZ89 1909 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 C5orf42Q9H799 3197 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ABHD14A-ACY1A0A1B0GW23 586 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 UBE2QL1A1L167 161 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 LRIT2A6NDA9 550 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 WASH3PC4AMC7 463 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 OGG1O15527 345 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 AQP8O94778 261 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 PPP1R3DO95685 299 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 EDNRAP25101 427 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 ANXA11P50995 505 aaKnown RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 MECP2P51608 486 aaKnown RBP9.5□□□□□ -0.89
CLIP4-208ENST00000456385 IGSF11Q5DX21 431 aa9.5□□□□□ -0.89
CLIP4-208ENST00000456385 C9orf131Q5VYM1 1079 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms