RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 HRO43593 1189 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 NUDT21O43809 227 aaKnown RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PNMTP11086 282 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 CBR1P16152 277 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PSMB6P28072 239 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SLC6A1P30531 599 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 AHRP35869 848 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 WNT7BP56706 349 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 RPL23AP62750 156 aaKnown RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 BEX3Q00994 111 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SP2Q02086 613 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ACVR1Q04771 509 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PJVKQ0ZLH3 352 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 HSPB2Q16082 182 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SUSD1Q6UWL2 747 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 CCDC116Q8IYX3 515 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SYS1Q8N2H4 156 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 C2orf73Q8N5S3 287 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 OR5M8Q8NGP6 311 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 HOXB13Q92826 284 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 HGDQ93099 445 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PNPLA2Q96AD5 504 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 KLRG1Q96E93 195 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 NEURL3Q96EH8 262 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 NPAS1Q99742 590 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PTDSS2Q9BVG9 487 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TEX101Q9BY14 249 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TMPRSS13Q9BYE2 586 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PLEKHA2Q9HB19 425 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TAF9BQ9HBM6 251 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 CPNE7Q9UBL6 633 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TESQ9UGI8 421 aaKnown RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 STEAP1Q9UHE8 339 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 HHLA2Q9UM44 414 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TOPAZ1Q8N9V7 1692 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 A0A0A6YYH2 397 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PQLC2LA1A4F0 135 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 A6NJ64 397 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 DRGXA6NNA5 263 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF726A6NNF4 738 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 RNF212BA8MTL3 300 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF593O00488 134 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 DSCR3O14972 297 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 LILRB5O75023 590 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SOD1P00441 154 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 LPLP06858 475 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 CTSEP14091 401 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 RPA2P15927 270 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 NME2P22392 152 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 HTR2CP28335 458 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 LAP3P28838 519 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SCAND1P57086 179 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 HBA1P69905 142 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ACSM1Q08AH1 577 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TMEM115Q12893 351 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PDE7AQ13946 482 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 VGLL4Q14135 290 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 UBXN2BQ14CS0 331 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 MFSD13AQ14CX5 517 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 NKPD1Q17RQ9 610 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF628Q5EBL2 1059 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF362Q5T0B9 420 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 C1orf94Q6P1W5 598 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 LCTLQ6UWM7 567 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SULF2Q8IWU5 870 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TP53INP2Q8IXH6 220 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 LINC00469Q8N7U9 141 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 OR4K13Q8NH42 304 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SAT2Q96F10 170 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TBL1XR1Q9BZK7 514 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 LYRM2Q9NU23 88 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ACOD1A6NK06 481 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 LGALS8O00214 317 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 EDIL3O43854 480 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 KCNJ13O60928 360 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 PPP1R3DO95685 299 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SLURP2P0DP57 97 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 MTHFD2P13995 350 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 DPEP1P16444 411 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 NAGAP17050 411 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 GABRR2P28476 465 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 CRABP1P29762 137 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 HOXC13P31276 330 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 CTNNB1P35222 781 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TAS2R30P59541 319 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 EEF1A1P68104 462 aaKnown RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 EEF1A2Q05639 463 aaKnown RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ARHGAP19Q14CB8 494 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 TAF9Q16594 264 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF239Q16600 458 aaKnown RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SLC5A12Q1EHB4 618 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SOWAHCQ53LP3 525 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 EEF1A1P5Q5VTE0 462 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 C8orf82Q6P1X6 216 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-203ENST00000456367 C22orf39Q6P5X5 142 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 CD300LGQ6UXG3 332 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 CLEC9AQ6UXN8 241 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 SSX7Q7RTT5 188 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 RD3Q7Z3Z2 195 aa4.67□□□□□ -1.66
PCDH9-203ENST00000456367 GALNT16Q8N428 558 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms