RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CD79BP40259 229 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 MMEL1Q495T6 779 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 ABLIM2Q6H8Q1 611 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 NANOGP8Q6NSW7 305 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 SPATA21Q7Z572 469 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 LRRC58Q96CX6 371 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 DDIT4LQ96D03 193 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 PSD2Q9BQI7 771 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 SLC39A3Q9BRY0 314 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 OR11A1Q9GZK7 315 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 EVA1AQ9H8M9 152 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 NANOGQ9H9S0 305 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 BCO1Q9HAY6 547 aa15.45■□□□□ 0.06
USP39-208ENST00000455732 ING1Q9UK53 422 aaPredicted RBP15.45■□□□□ 0.06
USP39-208ENST00000455732 PRR14LQ5THK1 2151 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 TMEM72A0PK05 275 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 SERPINB7O75635 380 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 GOSR1O95249 250 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 FESP07332 822 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 YES1P07947 543 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 PCGF2P35227 344 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 GZMMP51124 257 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 PDK3Q15120 406 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 TESK1Q15569 626 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 TMEM201Q5SNT2 666 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 MTDHQ86UE4 582 aaKnown RBP15.44■□□□□ 0.06
USP39-208ENST00000455732 ZNF610Q8N9Z0 462 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 PCYOX1LQ8NBM8 494 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 NRGNQ92686 78 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 ZHX1-C8orf76Q96EF9 292 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 DACH2Q96NX9 599 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 POLDIP3Q9BY77 421 aaKnown RBP15.44■□□□□ 0.06
USP39-208ENST00000455732 ARMCX1Q9P291 453 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 TMEM181Q9P2C4 612 aa15.44■□□□□ 0.06
USP39-208ENST00000455732 IGKV3D-15A0A087WSY6 115 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 IGHV3-15A0A0B4J1V0 119 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 ZNF724A8MTY0 619 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 FRS3O43559 492 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 MFN2O95140 757 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 POU2F1P14859 743 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 CXCR1P25024 350 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 AQP1P29972 269 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 CCKARP32238 428 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 LSP1P33241 339 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 SEC24CP53992 1094 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 FAM27E3Q08E93 113 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 C6orf89Q6UWU4 347 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 COMTD1Q86VU5 262 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 CALHM3Q86XJ0 350 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 ARMC8Q8IUR7 673 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 TUSC5Q8IXB3 177 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 CADM2Q8N3J6 435 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 LSMEM1Q8N8F7 131 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 OR10A6Q8NH74 314 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 RP9Q8TA86 221 aaKnown RBP15.43■□□□□ 0.06
USP39-208ENST00000455732 C3orf49Q96BT1 292 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 POTEKPQ9BYX7 375 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 NSRP1Q9H0G5 558 aaKnown RBP15.43■□□□□ 0.06
USP39-208ENST00000455732 CLEC4MQ9H2X3 399 aaPredicted RBP15.43■□□□□ 0.06
USP39-208ENST00000455732 C12orf10Q9HB07 376 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 GID8Q9NWU2 228 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 TESMINQ9Y4I5 508 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 ITPR3Q14573 2671 aa15.43■□□□□ 0.06
USP39-208ENST00000455732 LOC100653049A0A140TA62 436 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 TMEM229AB2RXF0 380 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 TPST1O60507 370 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 GCM2O75603 506 aaPredicted RBP15.42■□□□□ 0.06
USP39-208ENST00000455732 KRT34O76011 436 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 KLK2P20151 261 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 CCNA2P20248 432 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 DRD4P21917 467 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 DNAJA1P31689 397 aaKnown RBP15.42■□□□□ 0.06
USP39-208ENST00000455732 UGT2B10P36537 528 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 H3F3AP84243 136 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 DMTNQ08495 405 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 RASGEF1BQ0VAM2 473 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 VMACQ2NL98 169 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 GLIPR1L2Q4G1C9 344 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 RABL3Q5HYI8 236 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 INTS11Q5TA45 600 aaKnown RBP15.42■□□□□ 0.06
USP39-208ENST00000455732 TFAP2EQ6VUC0 442 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 PATL1Q86TB9 770 aaKnown RBP15.42■□□□□ 0.06
USP39-208ENST00000455732 ATG4DQ86TL0 474 aaPredicted RBP15.42■□□□□ 0.06
USP39-208ENST00000455732 STK32CQ86UX6 486 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 CDC20BQ86Y33 519 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 PIGXQ8TBF5 258 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 ELAC2Q9BQ52 826 aaKnown RBP15.42■□□□□ 0.06
USP39-208ENST00000455732 FANCFQ9NPI8 374 aa15.42■□□□□ 0.06
USP39-208ENST00000455732 TESQ9UGI8 421 aaKnown RBP15.42■□□□□ 0.06
USP39-208ENST00000455732 PRRC2AP48634 2157 aaKnown RBP15.42■□□□□ 0.06
USP39-208ENST00000455732 ZC3H12DA2A288 527 aaKnown RBP15.41■□□□□ 0.06
USP39-208ENST00000455732 SH3D21A4FU49 640 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 A8MVM7 634 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 C16orf97H3BN30 126 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 SNX3O60493 162 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 EIF1BO60739 113 aaKnown RBP15.41■□□□□ 0.06
USP39-208ENST00000455732 NPIPB7O75200 414 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 C8BP07358 591 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 IMPDH2P12268 514 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 KCNJ5P48544 419 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms