RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OR8H2Q8N162 312 aa12.51□□□□□ -0.41
CLK3-203ENST00000454830 CARFQ8N187 725 aa12.51□□□□□ -0.41
CLK3-203ENST00000454830 NMNAT3Q96T66 252 aa12.51□□□□□ -0.41
CLK3-203ENST00000454830 TEAD3Q99594 435 aa12.51□□□□□ -0.41
CLK3-203ENST00000454830 KATNB1Q9BVA0 655 aa12.51□□□□□ -0.41
CLK3-203ENST00000454830 MCCC2Q9HCC0 563 aa12.51□□□□□ -0.41
CLK3-203ENST00000454830 TXNL4BQ9NX01 149 aaKnown RBP12.51□□□□□ -0.41
CLK3-203ENST00000454830 PEX16Q9Y5Y5 336 aa12.51□□□□□ -0.41
CLK3-203ENST00000454830 A0A087WUJ7 227 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 TMEM129A0AVI4 362 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 C11orf98E9PRG8 122 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 PPM1BO75688 479 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 LALBAP00709 142 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 CLPSP04118 112 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 AHCYP23526 432 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 SDC2P34741 201 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 RANBP1P43487 201 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.5□□□□□ -0.41
CLK3-203ENST00000454830 PTP4A1Q93096 173 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 RASD2Q96D21 266 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 CRB3Q9BUF7 120 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 CRNNQ9UBG3 495 aaPredicted RBP12.5□□□□□ -0.41
CLK3-203ENST00000454830 FRYLO94915 3013 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 IGHV5-10-1A0A0J9YXX1 117 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 MAGEB4O15481 346 aaPredicted RBP12.5□□□□□ -0.41
CLK3-203ENST00000454830 HNRNPCP07910 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLK3-203ENST00000454830 CRYBB2P43320 205 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 RPS5P46782 204 aaKnown RBP12.5□□□□□ -0.41
CLK3-203ENST00000454830 CTBP2P56545 445 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 OR1N1Q8NGS0 311 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 HOXB13Q92826 284 aaPredicted RBP12.5□□□□□ -0.41
CLK3-203ENST00000454830 NAT6Q93015 286 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 ZNF12P17014 697 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 ABCD3P28288 659 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 ZXDAP98168 799 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 INSL4Q14641 139 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 NANOGNBQ7Z5D8 188 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 JAZF1Q86VZ6 243 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 C1orf210Q8IVY1 113 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 MOSPD2Q8NHP6 518 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 DUSP19Q8WTR2 217 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 COX4I2Q96KJ9 171 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 KLHDC3Q9BQ90 382 aa12.5□□□□□ -0.41
CLK3-203ENST00000454830 EML5Q05BV3 1969 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 LOC110117498-PIK3R3F6TDL0 507 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 ACVR1BP36896 505 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 DCDP81605 110 aaKnown RBP12.49□□□□□ -0.41
CLK3-203ENST00000454830 TOMM34Q15785 309 aaPredicted RBP12.49□□□□□ -0.41
CLK3-203ENST00000454830 RHBDD2Q6NTF9 364 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 PAPD4Q6PIY7 484 aaKnown RBP12.49□□□□□ -0.41
CLK3-203ENST00000454830 SLITRK4Q8IW52 837 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 POC5Q8NA72 575 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 SMPDL3BQ92485 455 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 OCIAD1Q9NX40 245 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 CAB39Q9Y376 341 aaPredicted RBP12.49□□□□□ -0.41
CLK3-203ENST00000454830 IGKV3-11P04433 115 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 GP1BBP13224 206 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 CPEP16870 476 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 CTXN1P60606 82 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 PON3Q15166 354 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 NLGN4YQ8NFZ3 816 aaPredicted RBP12.49□□□□□ -0.41
CLK3-203ENST00000454830 HTRA1Q92743 480 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 ARHGAP9Q9BRR9 750 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 FBXO8Q9NRD0 319 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 ZNF337Q9Y3M9 751 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 TECTAO75443 2155 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 H3BMH7 237 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 PSMD9O00233 223 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 PYCR1P32322 319 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 DCAF7P61962 342 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 ZNF117Q03924 483 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 MFSD4AQ8N468 514 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 Q96M85 177 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 LPAR4Q99677 370 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 RTN4RQ9BZR6 473 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 EVA1AQ9H8M9 152 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 SMURF1Q9HCE7 757 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 SLC22A11Q9NSA0 550 aa12.49□□□□□ -0.41
CLK3-203ENST00000454830 CCDC59Q9P031 241 aaKnown RBP12.49□□□□□ -0.41
CLK3-203ENST00000454830 TEX13CA0A0J9YWL9 993 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 TRBV11-1A0A0K0K1C0 115 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 ZNF670-ZNF695F2Z2N8 137 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 H7C1C5 153 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 IMPA2O14732 288 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 PTP4A3O75365 173 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 OR7A10O76100 309 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 DLGAP3O95886 979 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 PLGP00747 810 aaPredicted RBP12.48□□□□□ -0.41
CLK3-203ENST00000454830 PNMTP11086 282 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 GALNSP34059 522 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 LCN6P62502 163 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 LGALS3BPQ08380 585 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 LEG1Q6P5S2 330 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 FAM199XQ6PEV8 388 aaPredicted RBP12.48□□□□□ -0.41
CLK3-203ENST00000454830 ZNF322Q6U7Q0 402 aaPredicted RBP12.48□□□□□ -0.41
CLK3-203ENST00000454830 DCDC5Q6ZRR9 648 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 SNX33Q8WV41 574 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 MOGAT1Q96PD6 335 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms