RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 DNAJB13P59910 316 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SNRPD2P62316 118 aaKnown RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RUNX1T1Q06455 604 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 HNRNPA0Q13151 305 aaKnown RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PDCD2Q16342 344 aaPredicted RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 UGT3A2Q3SY77 523 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ARL13AQ5H913 290 aaPredicted RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IL23RQ5VWK5 629 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TYW3Q6IPR3 259 aaKnown RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF544Q6NX49 715 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KLHL24Q6TFL4 600 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 THSD4Q6ZMP0 1018 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FRRS1Q6ZNA5 592 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TRMT10CQ7L0Y3 403 aaKnown RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF771Q7L3S4 317 aaPredicted RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MTDHQ86UE4 582 aaKnown RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GPAT4Q86UL3 456 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LCA5Q86VQ0 697 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CARM1Q86X55 608 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CDK20Q8IZL9 346 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SVOPLQ8N434 492 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FNDC5Q8NAU1 212 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FAM71CQ8NEG0 241 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR4A15Q8NGL6 344 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PIGXQ8TBF5 258 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PNPT1Q8TCS8 783 aaKnown RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SFXN5Q8TD22 340 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ACMSDQ8TDX5 336 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 UBLCP1Q8WVY7 318 aaPredicted RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR5P2Q8WZ92 322 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ST8SIA1Q92185 356 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZG16BQ96DA0 208 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCDC126Q96EE4 140 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PLA2G12AQ9BZM1 189 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GRIP2Q9C0E4 1043 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 BHLHE41Q9C0J9 482 aaPredicted RBP5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NMUR2Q9GZQ4 415 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LAT2Q9GZY6 243 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CA10Q9NS85 328 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ACER3Q9NUN7 267 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SEC14L4Q9UDX3 406 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FLVCR1Q9Y5Y0 555 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NOTCH1P46531 2555 aa5.22□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TMED7-TICAM2A0A0A6YYA0 188 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SH3PXD2BA1X283 911 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM114B3SHH9 223 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EIF4E2O60573 245 aaKnown RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 STX11O75558 287 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 VENTXO95231 258 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CHEK2O96017 543 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CHRM4P08173 479 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CSF3P09919 207 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CECR9P0C854 216 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GKN3PP0CG01 181 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF23P17027 643 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PGCP20142 388 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MATN1P21941 496 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TACR3P29371 465 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LCN1P31025 176 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SRP14P37108 136 aaKnown RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IDH2P48735 452 aaKnown RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SELENOPP49908 381 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IDH3GP51553 393 aaPredicted RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC16A1P53985 500 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NME5P56597 212 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CSNK2A1P68400 391 aaPredicted RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NPRL3Q12980 569 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 BNIP2Q12982 314 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OR7A5Q15622 319 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ADIPOQQ15848 244 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF141Q15928 474 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MSMPQ1L6U9 139 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SWI5Q1ZZU3 235 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TBRG1Q3YBR2 411 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RPS26P11Q5JNZ5 115 aaPredicted RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C6orf136Q5SQH8 315 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OTUD3Q5T2D3 398 aaPredicted RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZCCHC12Q6PEW1 402 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DEF8Q6ZN54 512 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 EIF3MQ7L2H7 374 aaKnown RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GRINAQ7Z429 371 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 C6orf120Q7Z4R8 191 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 R3HCC1LQ7Z5L2 792 aaKnown RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 P2RY8Q86VZ1 359 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MEX3DQ86XN8 651 aaKnown RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ADGRG3Q86Y34 549 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM99Q8N816 258 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ANKFN1Q8N957 763 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OR9K2Q8NGE7 335 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PSMA8Q8TAA3 256 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC25A43Q8WUT9 341 aaPredicted RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 XAGE5Q8WWM1 108 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TUBGCP3Q96CW5 907 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZHX1-C8orf76Q96EF9 292 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 APOPT1Q96IL0 206 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DUSP26Q9BV47 211 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HOXD1Q9GZZ0 328 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IQCGQ9H095 443 aaKnown RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NELFAQ9H3P2 528 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 METTL17Q9H7H0 456 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms