RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CPN1P15169 458 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF23P17027 643 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 RRM2P31350 389 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 DNAJA1P31689 397 aaKnown RBP11.73□□□□□ -0.53
VPS33A-202ENST00000451053 SFTPDP35247 375 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 RAC1P63000 192 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 ST3GAL3Q11203 375 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 SELENBP1Q13228 472 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 EIF2S3LQ2VIR3 472 aaKnown RBP11.73□□□□□ -0.53
VPS33A-202ENST00000451053 WLSQ5T9L3 541 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 HMBOX1Q6NT76 420 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 C3orf33Q6P1S2 294 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF585AQ6P3V2 769 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 C3P1Q6ZMU1 363 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 TSEN54Q7Z6J9 526 aaKnown RBP11.73□□□□□ -0.53
VPS33A-202ENST00000451053 ATG4DQ86TL0 474 aaPredicted RBP11.73□□□□□ -0.53
VPS33A-202ENST00000451053 GGNQ86UU5 652 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 DOLPP1Q86YN1 238 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 HIPK1Q86Z02 1210 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 OFCC1Q8IZS5 231 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 ICA1LQ8NDH6 482 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 SELENONQ9NZV5 590 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 CHRNA9Q9UGM1 479 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 SH3BGRL2Q9UJC5 107 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 TMED7Q9Y3B3 224 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 SAMHD1Q9Y3Z3 626 aaKnown RBP11.73□□□□□ -0.53
VPS33A-202ENST00000451053 TESMINQ9Y4I5 508 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 DNAJC13O75165 2243 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 A0A0J9YW62 118 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 TRAPPC13A5PLN9 417 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 KDM4EB2RXH2 506 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-202ENST00000451053 TNFRSF11BO00300 401 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 DIRAS1O95057 198 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 LYPD3O95274 346 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 THY1P04216 161 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 PLA2G2AP14555 144 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 FPR1P21462 350 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 YAP1P46937 504 aaKnown RBP11.72□□□□□ -0.53
VPS33A-202ENST00000451053 PTDSS1P48651 473 aaKnown RBP11.72□□□□□ -0.53
VPS33A-202ENST00000451053 CDH12P55289 794 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 TRAM2Q15035 370 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 BCL2A1Q16548 175 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 CTU2Q2VPK5 515 aaKnown RBP11.72□□□□□ -0.53
VPS33A-202ENST00000451053 TMEM176BQ3YBM2 270 aaPredicted RBP11.72□□□□□ -0.53
VPS33A-202ENST00000451053 ALG10BQ5I7T1 473 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
VPS33A-202ENST00000451053 C1QL3Q5VWW1 255 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF613Q6PF04 617 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 SHQ1Q6PI26 577 aaKnown RBP11.72□□□□□ -0.53
VPS33A-202ENST00000451053 ZDHHC13Q8IUH4 622 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 LINC00471Q8N535 108 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 MEIOBQ8N635 442 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 OR5K1Q8NHB7 308 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 ADAMTS16Q8TE57 1224 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 ADGRG7Q96K78 797 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 DHRS1Q96LJ7 313 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 KLHL15Q96M94 604 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 TUBA1CQ9BQE3 449 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 OR11A1Q9GZK7 315 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 SERINC1Q9NRX5 453 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 ALKBH4Q9NXW9 302 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 TMCC3Q9ULS5 477 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 A4GNTQ9UNA3 340 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 KALRNO60229 2985 aa11.72□□□□□ -0.53
VPS33A-202ENST00000451053 TRGV8A0A0C4DH27 118 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 A0A1W2PRQ8 180 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ZC3H12DA2A288 527 aaKnown RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ELOA3DA6NLF2 546 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 G3V2T6 193 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 J3KTA2 159 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 EIF1AYO14602 144 aaKnown RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 PRRG2O14669 202 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 TNFSF11O14788 317 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 STSP08842 583 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 TFPIP10646 304 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 PTNP21246 168 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 FUT4P22083 530 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 CXCR1P25024 350 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 VHLP40337 213 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 CA7P43166 264 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 HMGA2P52926 109 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 PIN1Q13526 163 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 DGCR6Q14129 220 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ELOA3BQ3SY89 546 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 SYT14P1Q58G82 188 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 FGD3Q5JSP0 725 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 OGFRL1Q5TC84 451 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 RTL6Q6ICC9 239 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ULK3Q6PHR2 472 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 PLXDC2Q6UX71 529 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 PM20D2Q8IYS1 436 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 RPRMLQ8N4K4 120 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 PACRGLQ8N7B6 248 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 ELOA3Q8NG57 546 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 OR2V1Q8NHB1 315 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 PRR7Q8TB68 274 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 RNF217Q8TC41 542 aa11.71□□□□□ -0.53
VPS33A-202ENST00000451053 DNAJA4Q8WW22 397 aaPredicted RBP11.71□□□□□ -0.53
VPS33A-202ENST00000451053 DNAJA3Q96EY1 480 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms