RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 PLEKHA3Q9HB20 300 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 LSM5Q9Y4Y9 91 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 LOC105369274A0A096LPK9 316 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 GAAP10253 952 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 ADARB1P78563 741 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 MZT1Q08AG7 82 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 UBE2UQ5VVX9 321 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 KDM4DQ6B0I6 523 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 OR4N4Q8N0Y3 316 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 FNDC9Q8TBE3 224 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 SPDEFO95238 335 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 PTHP01270 115 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 NPPBP16860 134 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 FXYD4P59646 89 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 RPS25P62851 125 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 COL9A2Q14055 689 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 COX20Q5RI15 118 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 AFMIDQ63HM1 303 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 VASNQ6EMK4 673 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 TSSK4Q6SA08 328 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 FAM83FQ8NEG4 500 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 RNF128Q8TEB7 428 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 ZBTB8AQ96BR9 441 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 PFDN5Q99471 154 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 GON7Q9BXV9 100 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 TSPAN10Q9H1Z9 355 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 EMC3Q9P0I2 261 aa12.3□□□□□ -0.44
SMARCA4-205ENST00000450717 DDX60LQ5H9U9 1706 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 FZD7O75084 574 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 GABARAPO95166 117 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 MT-CO2P00403 227 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 RPP30P78346 268 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 BCL2A1Q16548 175 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 TATDN3Q17R31 274 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SYT6Q5T7P8 510 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SLX4IPQ5VYV7 408 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 CMIPQ8IY22 773 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 IL17RDQ8NFM7 739 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 ZFAND1Q8TCF1 268 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 NRIP3Q9NQ35 241 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 ASF1BQ9NVP2 202 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 IFNA4P05014 189 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 TPT1P13693 172 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 POU3F2P20265 443 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 ERVK-16P61578 105 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SLC2A12Q8TD20 617 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 RADILQ96JH8 1075 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 RHBDD3Q9Y3P4 386 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 IGLV3-25P01717 112 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 MSX1P28360 303 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 POLR2IP36954 125 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SNRPGP62308 76 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 LTB4RQ15722 352 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 TANGO2Q6ICL3 276 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 NIPAL3Q6P499 406 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 PPP1R3BQ86XI6 285 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 ZNF454Q8N9F8 522 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 RPL3LQ92901 407 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 GIMAP5Q96F15 307 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SLC41A2Q96JW4 573 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SLC35E2P0CK97 266 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SIRPAP78324 504 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 CSNK1G2P78368 415 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 ACTBL2Q562R1 376 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 CST9Q5W186 159 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 ELP2Q6IA86 826 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 DLEU7Q6UYE1 221 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SIAEQ9HAT2 523 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 C1GALT1Q9NS00 363 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 SEMA4GQ9NTN9 838 aa12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 TXNL4BQ9NX01 149 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-205ENST00000450717 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 SUSD5O60279 629 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 MTHFD2P13995 350 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 HMGA1P17096 107 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 BLOC1S1P78537 153 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 IL13RA1P78552 427 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 POU3F1Q03052 451 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 RAB31Q13636 194 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 TMEM201Q5SNT2 666 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 ABHD17CQ6PCB6 329 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 TBPL2Q6SJ96 375 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 OR56B4Q8NH76 319 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 GCDHQ92947 438 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 C1QTNF3Q9BXJ4 246 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 AMBRA1Q9C0C7 1298 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 KIR3DX1Q9H7L2 352 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 NDUFAF4Q9P032 175 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 A3GALT2U3KPV4 340 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 AQP9O43315 295 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 CD79AP11912 226 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 PTPN6P29350 595 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 CTHP32929 405 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 CXADRP78310 365 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 OTUD1Q5VV17 481 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 C18orf63Q68DL7 685 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 PSD2Q9BQI7 771 aa12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 ZNF436Q9C0F3 470 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-205ENST00000450717 SEMA6CQ9H3T2 930 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms