RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 VASNQ6EMK4 673 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 TBPL2Q6SJ96 375 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 RRM2BQ7LG56 351 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 TMEM179BQ7Z7N9 219 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 LSRQ86X29 649 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-210ENST00000449116 P3H2Q8IVL5 708 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 NRMQ8IXM6 262 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 LINC00471Q8N535 108 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 ICA1LQ8NDH6 482 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 OR4K5Q8NGD3 323 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 OR5K1Q8NHB7 308 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 SMPDL3BQ92485 455 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 POTEKPQ9BYX7 375 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 KLHL4Q9C0H6 718 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 OR11A1Q9GZK7 315 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 RNPEPL1Q9HAU8 725 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 KRCC1Q9NPI7 259 aaPredicted RBP13.19□□□□□ -0.3
SHANK2-210ENST00000449116 SPRR3Q9UBC9 169 aa13.19□□□□□ -0.3
SHANK2-210ENST00000449116 TRAV36DV7A0A075B6V5 113 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 TTLL8A6PVC2 850 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 PIP5K1CO60331 668 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 OR10H3O60404 316 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 WISP2O76076 250 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 AHSA1O95433 338 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 IGF2P01344 180 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 OPN1LWP04000 364 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 TFPIP10646 304 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 ZNF23P17027 643 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 SHC1P29353 583 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 SFTPDP35247 375 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 IFNGR2P38484 337 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 STARP49675 285 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 LHX2P50458 406 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 TDGF1P3P51864 188 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 LSM11P83369 360 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHANK2-210ENST00000449116 CRYZQ08257 329 aaKnown RBP13.18□□□□□ -0.3
SHANK2-210ENST00000449116 NFATC3Q12968 1075 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 BCL2A1Q16548 175 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 TMEM176BQ3YBM2 270 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-210ENST00000449116 PRR30Q53SZ7 412 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-210ENST00000449116 C1orf140Q5VVS0 124 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 ARHGAP11AQ6P4F7 1023 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 HIPK1Q86Z02 1210 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 ZDHHC13Q8IUH4 622 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 GHDCQ8N2G8 530 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 SVOPLQ8N434 492 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 OR10G2Q8NGC3 310 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 PFN4Q8NHR9 129 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 PIGXQ8TBF5 258 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 SDCCAG3Q96C92 435 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 KTI12Q96EK9 354 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-210ENST00000449116 KLHL15Q96M94 604 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 BARD1Q99728 777 aaKnown RBP13.18□□□□□ -0.3
SHANK2-210ENST00000449116 SLX1AQ9BQ83 275 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 MEPEQ9NQ76 525 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-210ENST00000449116 PDP1Q9P0J1 537 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-210ENST00000449116 HDGFL3Q9Y3E1 203 aa13.18□□□□□ -0.3
SHANK2-210ENST00000449116 ATRXP46100 2492 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 SPTA1P02549 2419 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 A0A1B0GTH9 108 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 HTR3EA5X5Y0 456 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 ARRDC5A6NEK1 342 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 SAC3D1A6NKF1 404 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 ENO4A6NNW6 628 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 G3V2T6 193 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 SEC14L5O43304 696 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 OR2T1O43869 369 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 ATP6V1G2O95670 118 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 FREM3P0C091 2139 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 IFI30P13284 250 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 ZNF708P17019 499 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 IDUAP35475 653 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 RPS5P46782 204 aaKnown RBP13.17□□□□□ -0.3
SHANK2-210ENST00000449116 CTBP2P56545 445 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 CLDN18P56856 261 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 CLDN20P56880 219 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 HSF1Q00613 529 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 PRKCDQ05655 676 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 SLC34A1Q06495 639 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 FAM69AQ5T7M9 428 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 C1QL3Q5VWW1 255 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 ZNF770Q6IQ21 691 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-210ENST00000449116 ESPNLQ6ZVH7 1005 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 GGNQ86UU5 652 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 MEIOBQ8N635 442 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 OR9Q2Q8NGE9 314 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 OR6S1Q8NH40 331 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 RELTQ969Z4 430 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 SARAFQ96BY9 339 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 ARL5BQ96KC2 179 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 OR5B2Q96R09 309 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 TIMP4Q99727 224 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 PSD2Q9BQI7 771 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 PTDSS2Q9BVG9 487 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 C20orf141Q9NUB4 165 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 ASF1BQ9NVP2 202 aa13.17□□□□□ -0.3
SHANK2-210ENST00000449116 NKX1-2Q9UD57 310 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms