RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ETV6P41212 452 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 ZP2Q05996 745 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 FAM69BQ5VUD6 431 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 C1QL3Q5VWW1 255 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 RNLSQ5VYX0 342 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 GDPGP1Q6ZNW5 385 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 TMPRSS11FQ6ZWK6 438 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 PHOSPHO1Q8TCT1 267 aa13.58□□□□□ -0.24
SF1-211ENST00000448404 IQCMA0A1B0GVH7 501 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 A0A1W2PR77 199 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 FAM172BPA6NC97 362 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 C2orf72A6NCS6 295 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 RIIAD1A6NNX1 92 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 CENPBD1B2RD01 187 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 SBK2P0C263 348 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 NME1P15531 152 aaKnown RBP13.57□□□□□ -0.24
SF1-211ENST00000448404 GABRA4P48169 554 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 BLKP51451 505 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 OR2B6P58173 313 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 IL18Q14116 193 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 TOMM34Q15785 309 aaPredicted RBP13.57□□□□□ -0.24
SF1-211ENST00000448404 SLC25A35Q3KQZ1 300 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 DDI2Q5TDH0 399 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 OR5M10Q6IEU7 315 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 ASCC1Q8N9N2 400 aaKnown RBP13.57□□□□□ -0.24
SF1-211ENST00000448404 OR5W2Q8NH69 310 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 CEP76Q8TAP6 659 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 DEPDC7Q96QD5 511 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 PDCD1LG2Q9BQ51 273 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 Q9N2J8 555 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 BABAM2Q9NXR7 383 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 GSTK1Q9Y2Q3 226 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 FER1L5A0AVI2 2057 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 FAM86C2PA6NEL3 165 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 PTTG1O95997 202 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 DCNP07585 359 aaKnown RBP13.57□□□□□ -0.24
SF1-211ENST00000448404 PEPDP12955 493 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 MST1P26927 711 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 TDGQ13569 410 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 ELOCQ15369 112 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.57□□□□□ -0.247e-8■■□□□ 13.2
SF1-211ENST00000448404 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.57□□□□□ -0.24
SF1-211ENST00000448404 BMPERQ8N8U9 685 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 THAP3Q8WTV1 239 aaPredicted RBP13.57□□□□□ -0.24
SF1-211ENST00000448404 PTPMT1Q8WUK0 201 aaPredicted RBP13.57□□□□□ -0.24
SF1-211ENST00000448404 RPS6KB2Q9UBS0 482 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 ZNF221Q9UK13 617 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 ING1Q9UK53 422 aaPredicted RBP13.57□□□□□ -0.24
SF1-211ENST00000448404 COPS3Q9UNS2 423 aa13.57□□□□□ -0.24
SF1-211ENST00000448404 OR6C68A6NDL8 312 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 PRR32B1ATL7 298 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 PLA2G10O15496 165 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 LANCL1O43813 399 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 RCBTB2O95199 551 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 SRFP11831 508 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 AQP2P41181 271 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 ZNF615Q8N8J6 731 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 ZNF511Q8NB15 262 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 A0A0B4J293 547 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 A0A1B0GTH9 108 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 TRDV1A0A1B0GX56 115 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 FAM221BA6H8Z2 402 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 CLDN4O14493 209 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 POLR1CO15160 346 aaPredicted RBP13.56□□□□□ -0.24
SF1-211ENST00000448404 SCO2O43819 266 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 OR2B3O76000 313 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 FOLR1P15328 257 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 DEFA1P59665 94 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 DEFA3P59666 94 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.56□□□□□ -0.24
SF1-211ENST00000448404 ATAD3CQ5T2N8 411 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 CD200R1LQ6Q8B3 271 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 CEACAM19Q7Z692 300 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 DNAJA4Q8WW22 397 aaPredicted RBP13.56□□□□□ -0.24
SF1-211ENST00000448404 HSD17B8Q92506 261 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 Q96M85 177 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 NKX3-1Q99801 234 aaPredicted RBP13.56□□□□□ -0.24
SF1-211ENST00000448404 LMF2Q9BU23 707 aaKnown RBP13.56□□□□□ -0.24
SF1-211ENST00000448404 OR2B2Q9GZK3 357 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 PLSCR3Q9NRY6 295 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 SLC35A3Q9Y2D2 325 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 EML5Q05BV3 1969 aa13.56□□□□□ -0.24
SF1-211ENST00000448404 A0A0G2JMP0 313 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 A0A0X1KG70 313 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 SERINC4A6NH21 518 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 METTL12A8MUP2 240 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 FAM25AB3EWG3 89 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 FAM25CB3EWG5 89 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 FAM25GB3EWG6 89 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 IGLV3-19P01714 112 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 APOA1P02647 267 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 HLA-DPB1P04440 258 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 ELK1P19419 428 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 FGFBP1Q14512 234 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 ODF4Q2M2E3 257 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 WDR45BQ5MNZ6 344 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 ZNF613Q6PF04 617 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 PAMR1Q6UXH9 720 aa13.55□□□□□ -0.24
SF1-211ENST00000448404 LANCL3Q6ZV70 420 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms