RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 RAB5AP20339 215 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 GPLD1P80108 840 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 AWAT2Q6E213 333 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 IL20RBQ6UXL0 311 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 TOMM20LQ6UXN7 152 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 TECPR1Q7Z6L1 1165 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 CNTN4Q8IWV2 1026 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 LINC01465Q8N7H1 131 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 LMNTD1Q8N9Z9 388 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 NETO1Q8TDF5 533 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 SPRYD4Q8WW59 207 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 FAM3CQ92520 227 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 CCNL2Q96S94 520 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 C20orf85Q9H1P6 137 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 PTGES2Q9H7Z7 377 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 IL17BQ9UHF5 180 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 MROH6A6NGR9 719 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 SLC2A1P11166 492 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 SERPINA2P20848 420 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 UQCRC2P22695 453 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 CCKBRP32239 447 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 TRHRP34981 398 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 SYT6Q5T7P8 510 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 LRFN4Q6PJG9 635 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 WDR74Q6RFH5 385 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 RELL2Q8NC24 303 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 FBXO15Q8NCQ5 510 aaPredicted RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 OVCA2Q8WZ82 227 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 MAL2Q969L2 176 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 UBE2FQ969M7 185 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 RGMAQ96B86 450 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 EGLN2Q96KS0 407 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 UBXN10Q96LJ8 280 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 RTP3Q9BQQ7 232 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 FAM103A1Q9BTL3 118 aaKnown RBP8.63□□□□□ -1.03
SMC6-207ENST00000448223 CABLES2Q9BTV7 478 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 KATNB1Q9BVA0 655 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 CORINQ9Y5Q5 1042 aa8.63□□□□□ -1.03
SMC6-207ENST00000448223 DVL2O14641 736 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 CLDN11O75508 207 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 OR2F2O95006 317 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 CNOT4O95628 575 aaKnown RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 H2BFMP0C1H6 154 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 PGCP20142 388 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 NTF3P20783 257 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 FDXRP22570 491 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 FCER1GP30273 86 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 FXYD4P59646 89 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 OR2F1Q13607 317 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 ARHGAP19Q14CB8 494 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 OR4K17Q8NGC6 315 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 OR4K5Q8NGD3 323 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 OR9Q2Q8NGE9 314 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 OR52P1PQ8NH57 321 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 ZNF417Q8TAU3 575 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 NMNAT1Q9HAN9 279 aaPredicted RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 GDF2Q9UK05 429 aaPredicted RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 V9GY05 133 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 A0A0U1RQF3 1178 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 SYT7O43581 403 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 EPHA1P21709 976 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 PCBP1Q15365 356 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMC6-207ENST00000448223 GGNBP1Q5YKI7 109 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 USP50Q70EL3 339 aaPredicted RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 SULF2Q8IWU5 870 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 RGL4Q8IZJ4 473 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 ARL14EPQ8N8R7 260 aaPredicted RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 MDGA1Q8NFP4 955 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 SUSD6Q92537 303 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 DNAJA3Q96EY1 480 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 HHIPL1Q96JK4 782 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 UHRF2Q96PU4 802 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 ELF4Q99607 663 aaPredicted RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 ARHGDIGQ99819 225 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 NICN1Q9BSH3 213 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 MSTNO14793 375 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 SURF4O15260 269 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 LGI1O95970 557 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 HLA-DOBP13765 273 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 CTSEP14091 401 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 CSF2RAP15509 400 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 ADRA1AP35348 466 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 EMP3P54852 163 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 RAB11AP62491 216 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 CD300CQ08708 224 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 RCAN2Q14206 197 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 MEX3BQ6ZN04 569 aaKnown RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 Q6ZPB1 254 aaPredicted RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 SPRED1Q7Z699 444 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 HMGN2P46Q86SG4 172 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 TRAM1L1Q8N609 369 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 C15orf54Q8N8G6 183 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 SLC41A2Q96JW4 573 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 ZNF599Q96NL3 588 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 CERS4Q9HA82 394 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 NDRG2Q9UN36 371 aaKnown RBP8.62□□□□□ -1.03
SMC6-207ENST00000448223 LIPT1Q9Y234 373 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 ENPP4Q9Y6X5 453 aa8.62□□□□□ -1.03
SMC6-207ENST00000448223 DOCK1Q14185 1865 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms