RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 PGLYRP3Q96LB9 341 aa11.9□□□□□ -0.5
SHC1-210ENST00000448116 SLC25A18Q9H1K4 315 aa11.9□□□□□ -0.5
SHC1-210ENST00000448116 FLRT3Q9NZU0 649 aa11.9□□□□□ -0.5
SHC1-210ENST00000448116 ADAM18Q9Y3Q7 739 aa11.9□□□□□ -0.5
SHC1-210ENST00000448116 IMPA2O14732 288 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 ANXA3P12429 323 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 EMDP50402 254 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 GBX2P52951 348 aaPredicted RBP11.9□□□□□ -0.51
SHC1-210ENST00000448116 ADPRHP54922 357 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 LINGO2Q7L985 606 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 MS4A15Q8N5U1 240 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 YIPF5Q969M3 257 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 JAM3Q9BX67 310 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 GPR174Q9BXC1 333 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 AUNIPQ9H7T9 357 aa11.9□□□□□ -0.51
SHC1-210ENST00000448116 RANBP2P49792 3224 aaKnown RBP11.89□□□□□ -0.51
SHC1-210ENST00000448116 CACNA1IQ9P0X4 2223 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 A0A1B0GVT2 93 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 H3BSH0 61 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 ADAM11O75078 769 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 CDC123O75794 336 aaPredicted RBP11.89□□□□□ -0.51
SHC1-210ENST00000448116 LYPD3O95274 346 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 GPR75O95800 540 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 H2AFB2P0C5Z0 115 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 HIST1H1CP16403 213 aaKnown RBP11.89□□□□□ -0.51
SHC1-210ENST00000448116 SLC6A6P31641 620 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 FGFBP1Q14512 234 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 NDUFAF6Q330K2 333 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 DMKNQ6E0U4 476 aaPredicted RBP11.89□□□□□ -0.51
SHC1-210ENST00000448116 RPL13AP3Q6NVV1 102 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 SFTPA2Q8IWL1 248 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 FAM109AQ8N4B1 249 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 OR11H4Q8NGC9 324 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 OR52R1Q8NGF1 315 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
SHC1-210ENST00000448116 FAM3CQ92520 227 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 MS4A3Q96HJ5 214 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 DPCDQ9BVM2 203 aaPredicted RBP11.89□□□□□ -0.51
SHC1-210ENST00000448116 INPP5EQ9NRR6 644 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 ACTR10Q9NZ32 417 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 RPS6KB2Q9UBS0 482 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 CHD9Q3L8U1 2897 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 TFP02787 698 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 ANKRD34CP0C6C1 535 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 FCARP24071 287 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 CLDN12P56749 244 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 VSX2P58304 361 aaPredicted RBP11.89□□□□□ -0.51
SHC1-210ENST00000448116 TRAM1Q15629 374 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 DEFB110Q30KQ9 67 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 SDE2Q6IQ49 451 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 RBM14Q96PK6 669 aaKnown RBP11.89□□□□□ -0.51
SHC1-210ENST00000448116 DERL3Q96Q80 235 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 CHIAQ9BZP6 476 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 CD93Q9NPY3 652 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 NTMQ9P121 344 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 NUBP2Q9Y5Y2 271 aa11.89□□□□□ -0.51
SHC1-210ENST00000448116 IDSB3KWA1 339 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 CA3P07451 260 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 NGFRP08138 427 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 BPIFB3P59826 476 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 GPR18Q14330 331 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 ANGPT1Q15389 498 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 FCRL6Q6DN72 434 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 ZNF687Q8N1G0 1237 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 NT5CQ8TCD5 201 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 LGALS14Q8TCE9 139 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 HMGB4Q8WW32 186 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 OMA1Q96E52 524 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 PELI1Q96FA3 418 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 SCMH1Q96GD3 660 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 DUSP22Q9NRW4 184 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 EIF3KQ9UBQ5 218 aaKnown RBP11.88□□□□□ -0.51
SHC1-210ENST00000448116 FLVCR2Q9UPI3 526 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 PTPRSQ13332 1948 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 TRABD2BA6NFA1 517 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 ACOD1A6NK06 481 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 EPXP11678 715 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 ZNF81P51508 661 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 DGAT2L6Q6ZPD8 337 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 ZFYVE21Q9BQ24 234 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 CCDC3Q9BQI4 270 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 OR2W5A6NFC9 320 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 PRKNO60260 465 aaPredicted RBP11.88□□□□□ -0.51
SHC1-210ENST00000448116 PTP4A3O75365 173 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 ARL6IP5O75915 188 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 RPP14O95059 124 aaKnown RBP11.88□□□□□ -0.51
SHC1-210ENST00000448116 UBL3O95164 117 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 WNT1P04628 370 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 IL32P24001 234 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 PPM1FP49593 454 aaPredicted RBP11.88□□□□□ -0.51
SHC1-210ENST00000448116 SIRPAP78324 504 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 PON3Q15166 354 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 POU4F3Q15319 338 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 ZNF542PQ5EBM4 170 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 FRMD1Q8N878 549 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 HSPA12BQ96MM6 686 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 NMNAT3Q96T66 252 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 RANBP3Q9H6Z4 567 aaPredicted RBP11.88□□□□□ -0.51
SHC1-210ENST00000448116 MCCC2Q9HCC0 563 aa11.88□□□□□ -0.51
SHC1-210ENST00000448116 ARHGEF17Q96PE2 2063 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms